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Job DescriptionP30137
Confidence99.84%DateThu Jan 5 11:45:54 GMT 2012
Rank21Aligned Residues202
% Identity12%Templatec3inpA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:d-ribulose-phosphate 3-epimerase; PDBTitle: 2.05 angstrom resolution crystal structure of d-ribulose-phosphate 3-2 epimerase from francisella tularensis.
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70. .....
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Query Sequence  FPPVPFRSGLYPVVDSVQWIERLLDAGVRTLQLRIKDRRDEEVEADVVAAIALGRRYNARLFINDY. . . . . . . . . WRLAI
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Template Sequence  IQINPSILSADL. ARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFGPMVLKALRDYGITAGMDVHLMVKPVDALIESFA
Template Known Secondary structure 
BGGGS
G.GGTT


BSSSSS
B


T

S

SS
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   4.....10..... ....20.........30.........40.........50.........60.........70.........80..
 
   77..80.........90. ........100.........110.........120.........130.........140.........150..
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Query Sequence  KHQAYGVHLGQEDLQ. . . . ATDLNAIRAAGLRLGVSTHDDMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARH
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Template Sequence  KAGATSIVFHPEASEHIDRSLQLIKSFGIQAGLALNPATGIDCLKYVESNIDRVLIMSVNPGFQKFIPAMLDKAKEISKW
Template Known Secondary structure  T
S
GGG
S
TTTS
TT

SGGGTTTGGG
S
S
TT




TT
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   153.. ....160.........170.........180.........190.........200........
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Query Sequence  VER. LADYPTVAIGGISLARAPAVIATGVGSIAVVSAITQAADWRLATAQLLEIAGV
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Template Sequence  ISSTDRDILLEIDGGVNPYNIAEIAVCGVNAFVAGSAIFNSDSYKQTIDKMRDELNK
Template Known Secondary structure  TS

SS

TTTTTT

STSS
T
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   165....170.........180.........190.........200.........210.........220.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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