Return to main results Retrieve Phyre Job Id

Job DescriptionP30137
Confidence42.55%DateThu Jan 5 11:45:54 GMT 2012
Rank449Aligned Residues82
% Identity12%Templatec3hurA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:alanine racemase; PDBTitle: crystal structure of alanine racemase from oenococcus oeni
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   83......90.........100......... 110......... 120.........130.........140.........150.....
Predicted Secondary structure 







.....

..




















Query SS confidence 


























. . . . .









. .



































Query Sequence  VHLGQEDLQATDLNAIRAAGLRLGVST. . . . . HDDMEIDVAL. . AARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVER
Query Conservation 


   
              


 
 .....
   
   
 ..  




   
 
 
 

       
   
      
Alig confidence 


























.....









..










...............









Template Conservation 


 

  
   
        
  









   

  
    
     

 ...............  

  

  
Template Sequence  VDLDAAAHNLQEIREWTKAKKVYAVLKADGYGLGAIPLAKAFQETASADALIVSN. . . . . . . . . . . . . . . LDEALELRQA
Template Known Secondary structure  T
S

T
TT

SS
...............T
Template Predicted Secondary structure 
















...............
Template SS confidence 















































































   13......20.........30.........40.........50.........60....... ..70.......
 
   156...160.........170.........
Predicted Secondary structure 










Query SS confidence 























Query Sequence  LADYPTVAIGGISLARAPAVIATG
Query Conservation      

 




   

  
   
Alig confidence 























Template Conservation 
    



               
Template Sequence  DLTLPIWVLGAWDYSDLKLFIDHD
Template Known Secondary structure  T

S
SS


GGGTT
Template Predicted Secondary structure 










Template SS confidence 























   78.80.........90.........100.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions