Return to main results Retrieve Phyre Job Id

Job DescriptionP30137
Confidence75.18%DateThu Jan 5 11:45:54 GMT 2012
Rank352Aligned Residues96
% Identity17%Templatec3eb2A_
PDB info PDB header:lyaseChain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution
Resolution2.04 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   112.......120.........130.........140.........150........ .160... ......170........ .180....
Predicted Secondary structure 























..

.




....


Query SS confidence 














































. .




.














. . . .





Query Sequence  DMEIDVALAARPSYIALGHVFPTQTKQMPSAPQGLEQLARHVERLAD. . YPTVA. IGGISLARAPAVIAT. . . . GVGSIA
Query Conservation    
   
   




   
 
 
 

       
   
         .. 

 
.



   

  
   ....

 


Alig confidence 















...



























..




.














....





Template Conservation     
  
   

 

 ...
 
 


   

 


  
             

 

   

   
  
  
   


 
 
Template Sequence  GRLCDDLIQAGVHGLT. . . PLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTSVADAVAQAKLYEKLGADGIL
Template Known Secondary structure  TT
S
BB...TTSGGGTGGG

TTSS
BSST
S
Template Predicted Secondary structure 



...





















Template SS confidence 















































































   28.30.........40... ......50.........60.........70.........80.........90.........100....
 
   185....190.........200.........210
Predicted Secondary structure 







Query SS confidence 

























Query Sequence  VVSAITQAADWRLATAQLLEIAGVGD
Query Conservation 
 


  
 

      
  
     
Alig confidence 

























Template Conservation 
  
         
      

    
Template Sequence  AILEAYFPLKDAQIESYFRAIADAVE
Template Known Secondary structure 

SS



S
Template Predicted Secondary structure 










Template SS confidence 

























   105....110.........120.........130
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions