Job Description P30137 Confidence 98.81% Date Thu Jan 5 11:45:54 GMT 2012 Rank 84 Aligned Residues 177 % Identity 13% Template c3cu2A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:ribulose-5-phosphate 3-epimerase; PDBTitle: crystal structure of ribulose-5-phosphate 3-epimerase (yp_718263.1)2 from haemophilus somnus 129pt at 1.91 a resolution Resolution 1.91 Å

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		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.							.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.			.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure																		.	.	.	.	.	.																																		.	.	.											.	.
Query SS confidence																		.	.	.	.	.	.																																		.	.	.											.	.
Query Sequence		Q	W	I	E	R	L	L	D	A	G	V	R	T	L	Q	L	.	.	.	.	.	.	R	I	K	D	R	R	D	E	E	V	E	A	D	V	V	A	A	I	A	L	G	R	R	Y	N	A	R	L	F	I	N	D	Y	.	.	.	W	R	L	A	I	K	H	Q	A	Y	.	.	G	V	H	L	G	Q	E	D	L	Q
Query Conservation																		.	.	.	.	.	.																																		.	.	.											.	.
Alig confidence																		.	.	.	.	.	.									.	.									.															.	.	.											.	.
Template Conservation																																.	.									.
Template Sequence		E	E	V	T	T	L	L	E	N	Q	I	N	V	L	H	F	D	I	A	D	G	Q	F	S	S	L	F	T	V	G	.	.	A	I	G	I	K	Y	F	P	.	T	H	C	F	K	D	V	H	L	X	V	R	N	Q	L	E	V	A	K	A	V	V	A	N	G	A	N	L	V	T	L	Q	L	E	Q	Y	H	D	F
Template Known Secondary structure										T	T										B	S	S	S	S	S		B		B		.	.	T					T	S		.	T	T	S									S												T	T		S						T	T		T	T	S
Template Predicted Secondary structure																																.	.									.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.										.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.					.
Predicted Secondary structure												.	.	.	.	.	.	.	.	.										.	.																																														.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.										.	.																																														.	.	.	.
Query Sequence		A	T	D	L	N	A	I	R	A	A	.	.	.	.	.	.	.	.	.	G	L	R	L	G	V	S	T	H	.	.	D	D	M	E	I	D	V	A	L	A	A	R	P	S	Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L	E	Q	L	A	R	H	V	E	R	.	.	.	.	L
Query Conservation												.	.	.	.	.	.	.	.	.										.	.																																														.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.										.	.																																	.													.	.	.	.
Template Conservation																																																																.
Template Sequence		A	L	T	I	E	W	L	A	K	Q	K	T	T	Y	A	N	Q	V	Y	P	V	L	I	G	A	C	L	C	P	E	T	P	I	S	E	L	E	P	Y	L	D	Q	I	D	V	I	Q	L	L	T	L	D	P	R	N	G	T	K	Y	P	S	E	.	L	I	L	D	R	V	I	Q	V	E	K	R	L	G	N	R	R
Template Known Secondary structure									T	T						T	T													T	T	S		G	G	G	G	T	T	T	T	T	T		S						S			T	T	T	T							.														G	G	G	G
Template Predicted Secondary structure																																																																.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		A	D	Y	P	T	V	A	I	G	G	I	S	L	A	R	A	P	A	V	I	A	T	G	V	.	.	G	S	I	A	V	V	S	A	I	T	Q	A	A	D	W	R	L	A	T	A	Q	L	L	E
Query Conservation																										.	.
Alig confidence																										.	.												.
Template Conservation																																							.
Template Sequence		V	E	K	L	I	N	I	D	G	S	X	T	L	E	L	A	K	Y	F	K	Q	G	T	H	Q	I	D	W	L	V	S	G	S	A	L	F	S	.	G	E	L	K	T	N	L	K	V	W	K	S
Template Known Secondary structure		G	G							S	S												S	S	S									G	G	G	G	S	.	S
Template Predicted Secondary structure																																							.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.		.	.	.	.	.	.	.	.	230	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions