Job Description P30137 Confidence 96.64% Date Thu Jan 5 11:45:54 GMT 2012 Rank 190 Aligned Residues 161 % Identity 13% Template c2vgbB_ PDB info PDB header:transferase Chain: B: PDB Molecule:pyruvate kinase isozymes r/l; PDBTitle: human erythrocyte pyruvate kinase Resolution 2.73 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.									.	.	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Query Sequence		F	P	P	V	P	F	R	S	G	L	Y	P	V	V	D	S	V	Q	W	I	E	R	L	L	D	A	G	V	R	T	L	Q	L	R	I	K	D	R	R	D	E	E	V	E	A	D	V	V	A	A	I	A	L	G	R	R	Y	N	.	.	.	.	.	.	.	.	A	R	L	F	I	N	.	.	.	.	.	.	.	.
Query Conservation																																																												.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Alig confidence																																																												.	.	.	.	.	.	.	.							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	R	S	T	S	I	I	A	T	I	G	P	A	S	R	S	V	E	R	L	K	E	M	I	K	A	G	M	N	I	A	R	L	N	F	S	H	G	S	H	E	Y	H	A	E	S	I	A	N	V	R	E	A	V	E	S	F	A	G	S	P	L	S	Y	R	P	V	A	I	A	L	D	T	K	G	P	E	I	R	T
Template Known Secondary structure					S							S	G	G	G		S											T								T	T	S	S																		T	T	T	T		T	T	T													S			B	B
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
																						70	.	.	.	.	.	.	.	.	.																													80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	Y	W	R	L	A	I	K	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	Y	G	V	H	L	G	Q	E	D	L	Q	A	T	D	L	N	A	I	R	A	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		G	I	V	E	L	V	K	G	S	Q	V	L	V	T	A	N	T	V	W	V	D	Y	P	N	I	V	R	V	V	P	V	G	G	R	I	Y	I	D	D	G	L	I	S	L	V	V	V	T	Q	V	E	N	G	G	V	L	G	S	R	K	G	V	N	L	P	G	A	Q	V	D	L	P	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T												B	S		T	T							T	T						T	T	T	T																	S	S		B				S	S	S				S		.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.								.	.
Query SS confidence																																																									.								.	.
Query Sequence		G	L	R	L	G	V	S	T	H	D	D	M	E	I	D	V	A	L	A	A	R	P	S	Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L	E	Q	L	A	R	H	V	E	R	L	.	A	D	Y	P	T	V	A	.	.	I	G	G	I	S	L	A	R	A	P	A	V	I	A	T
Query Conservation																																																									.								.	.
Alig confidence		.	.	.	.																											.	.	.	.	.	.	.	.	.																	.								.	.
Template Conservation		.	.	.	.																											.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	G	L	S	E	Q	D	V	R	D	L	R	F	G	V	E	H	G	V	D	I	V	F	A	S	F	V	.	.	.	.	.	.	.	.	.	R	K	A	S	D	V	A	A	V	R	A	A	L	G	P	E	G	H	G	I	K	I	I	S	K	I	E	N	H	E	G	V	K	R	F	D	E	I	L	E	V
Template Known Secondary structure		.	.	.	.	S	S														T	T							T	T		.	.	.	.	.	.	.	.	.		S													G	G	G	S	S	S								S						T
Template Predicted Secondary structure		.	.	.	.																											.	.	.	.	.	.	.	.	.
Template SS confidence
						263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.										.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		179	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	G	S	I	A	V	V	S	A
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	S	D	G	I	M	V	A	R	G
Template Known Secondary structure		.	S	S
Template Predicted Secondary structure		.
Template SS confidence
			330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions