Job Description P30137 Confidence 93.72% Date Thu Jan 5 11:45:54 GMT 2012 Rank 242 Aligned Residues 188 % Identity 9% Template c2qygC_ PDB info PDB header:unknown function Chain: C: PDB Molecule:ribulose bisphosphate carboxylase-like protein 2; PDBTitle: crystal structure of a rubisco-like protein rlp2 from rhodopseudomonas2 palustris Resolution 3.30 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.										70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																			.	.	.	.	.																										.	.	.									.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.																										.	.	.									.	.	.	.	.	.	.	.	.
Query Sequence		D	S	V	Q	W	I	E	R	L	L	D	A	G	V	R	T	L	.	.	.	.	.	Q	L	R	I	K	D	R	R	D	E	E	V	E	A	D	V	V	A	A	I	A	L	G	R	R	.	.	.	Y	N	A	R	L	F	I	N	.	.	.	.	.	.	.	.	.	D	Y	W	R	L	A	I	K	H	Q	A	Y	G
Query Conservation																			.	.	.	.	.																										.	.	.									.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.																										.	.	.									.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	F	A	E	L	G	Y	Q	S	W	T	G	G	L	D	I	A	K	D	D	E	M	L	A	D	V	D	W	C	P	L	A	E	R	A	A	L	L	G	D	A	C	R	R	A	S	A	E	T	G	V	P	K	I	Y	L	A	N	I	T	D	E	V	D	R	L	T	E	L	H	D	V	A	V	A	N	G	A	G	A
Template Known Secondary structure														T		S						T	T			S		T	T	S																					S	S												T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	H	L	G	Q	E	D	L	Q	A	T	D	L	N	A	I	R	A	A	G	L	R	L	G	V	S	T	H	D	D	M	E	I	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	A	A	R	P	S	Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L	E
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	I	N	A	M	P	V	G	L	S	A	V	R	M	L	R	K	H	A	T	V	P	L	I	A	H	F	P	F	I	A	A	F	S	R	L	A	N	Y	G	I	H	S	R	V	M	T	R	L	Q	R	L	A	G	F	D	V	V	I	M	P	G	F	G	P	R	M	M	T	P	E	H	E	V	L	D	C	I	R
Template Known Secondary structure																			T	T			S							T	T						S		T	T	S															T		S							S	S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																.				.	.															.
Query SS confidence																																.				.	.															.
Query Sequence		Q	L	A	R	H	V	E	R	L	A	D	Y	P	T	V	A	I	G	G	I	S	L	A	R	A	P	A	V	I	A	.	T	G	V	.	.	G	S	I	A	V	V	S	A	I	T	Q	A	A	D	.	W	R	L	A	T	A	Q	L	L	E	I	A	G
Query Conservation																																.				.	.															.
Alig confidence																																.				.	.															.
Template Conservation
Template Sequence		A	C	L	E	P	M	G	P	I	K	P	C	L	P	V	P	G	G	S	D	S	A	A	T	L	E	N	V	Y	R	K	V	G	S	A	D	F	G	F	V	P	G	R	G	V	F	G	H	P	M	G	P	A	A	G	A	T	S	I	R	Q	A	W	D
Template Known Secondary structure					S		B	T	T	B									S	S			T	T	T										S	S							S	T	T	T	T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions