Job Description P30137 Confidence 85.60% Date Thu Jan 5 11:45:54 GMT 2012 Rank 311 Aligned Residues 151 % Identity 13% Template c2o7qA_ PDB info PDB header:oxidoreductase,transferase Chain: A: PDB Molecule:bifunctional 3-dehydroquinate dehydratase/shikimate PDBTitle: crystal structure of the a. thaliana dhq-dehydroshikimate-sdh-2 shikimate-nadp(h) Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		M	Y	Q	P	D	F	P	P	V	P	F	R	S	G	L	Y	P	V	V	D	S	V	Q	W	I	E	R	L	L	D	A	G	V	R	T	L	Q	L	R	I	K	D	R	R	D	E	E	V	E	A	D	V	V	A	A	I	A	L	G	R	R	Y	N	A	R	L	F	I	N	D	Y	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																	.	.																																		.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																																		.	.	.
Template Sequence		V	K	N	P	S	L	I	C	A	P	V	M	A	D	S	.	.	I	D	K	M	V	I	E	T	S	K	A	H	E	L	G	A	D	L	V	E	I	R	L	D	W	L	K	D	F	N	P	L	E	.	.	.	D	L	K	T	I	I	K	K	S	P	L	P	T	L	F	T	Y	R	P	K	W	E	G	G	Q	Y	E
Template Known Secondary structure				S											S	S	.	.															T		S						G	G	G		S	S						.	.	.										S	S								B	G	G	G	T	S	S	B
Template Predicted Secondary structure																	.	.																																		.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.			.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.				.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
											72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.			.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.											.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																					.	.																					.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																					.	.																					.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	W	R	L	A	I	K	H	Q	A	Y	G	V	H	L	G	Q	E	D	L	Q	.	.	A	T	D	L	N	A	I	R	A	A	G	L	R	L	G	V	S	T	H	D	.	.	.	.	.	.	.	.	.	.	D	M	E	I	D	V	A	L	A	A	R	P	S	Y	I	A	L	G	H
Query Conservation		.	.	.	.	.	.	.	.	.																					.	.																					.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																					.	.																					.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation																																																																																.	.
Template Sequence		G	D	E	N	E	R	R	D	V	L	R	L	A	M	E	L	G	A	D	Y	I	D	V	E	L	Q	V	A	S	E	F	I	K	S	I	D	G	K	K	P	G	K	F	K	V	I	V	S	S	H	N	Y	Q	N	T	P	S	V	E	D	L	D	G	L	V	A	R	I	Q	Q	T	G	A	D	I	V	K	I	.	.
Template Known Secondary structure		S															T	T		S																T	T	T				S	S										S	S																		T	T		S					.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L	E	Q	L	A	R	H	V	E	R	L	A	D	Y	P	T	V	A	I	G
Query Conservation
Alig confidence											.	.	.	.	.	.											.
Template Conservation											.	.	.	.	.	.											.
Template Sequence		A	T	T	A	V	D	I	A	D	.	.	.	.	.	.	V	A	R	M	F	H	I	T	S	K	.	A	Q	V	P	T	I	G	L	V
Template Known Secondary structure						S	S	G	G	G	.	.	.	.	.	.											.		S	S
Template Predicted Secondary structure											.	.	.	.	.	.											.
Template SS confidence
		243	.	.	.	.	.	.	250	.							.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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