Job Description P30137 Confidence 96.23% Date Thu Jan 5 11:45:54 GMT 2012 Rank 201 Aligned Residues 126 % Identity 9% Template c2jgqB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:triosephosphate isomerase; PDBTitle: kinetics and structural properties of triosephosphate2 isomerase from helicobacter pylori Resolution 2.3 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.											.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																		.	120	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	R	L	A	I	K	H	Q	A	Y	G	V	H	L	G	Q	E	D	L	Q	.	.	.	.	.	.	.	.	.	.	A	T	D	L	N	A	I	R	A	A	G	L	R	L	G	V	S	T	H	D	D	M	E	I	D	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	A	R	P	S
Query Conservation																						.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	H	L	E	E	L	K	I	H	T	L	L	I	G	H	S	E	R	R	T	L	L	K	E	S	P	S	F	L	K	E	K	F	D	F	F	K	S	K	N	F	K	I	V	Y	C	I	G	E	E	L	T	T	R	E	K	G	F	K	A	V	K	E	F	L	S	E	Q	L	E	N	I	D	L	N	Y	P	N	L
Template Known Secondary structure								T	T														T	S																	T	T																														T	T	S		T	T		T	T
Template Predicted Secondary structure
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.			.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure																																	.	.																							.
Query SS confidence																																	.	.																							.
Query Sequence		Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L	E	Q	L	A	R	H	V	E	R	.	.	L	A	D	Y	P	T	V	A	I	G	G	I	S	L	A	R	A	P	A	V	I	A	.	T	G	V	G	S	I	A	V	V	S	A	I	T	Q	A	A	D	W	R	L	A	T	A
Query Conservation																																	.	.																							.
Alig confidence															.	.	.																.	.																							.
Template Conservation															.	.	.
Template Sequence		V	V	A	Y	E	P	I	W	A	I	G	T	S	.	.	.	A	S	L	E	D	I	Y	L	T	H	G	F	L	K	Q	I	L	N	Q	K	T	P	L	L	Y	G	G	S	V	N	T	Q	N	A	K	E	I	L	G	I	D	S	V	D	G	L	L	I	G	S	A	S	W	E	L	E	N	F	K	T	I	I	S
Template Known Secondary structure								G	G	G	T	T			.	.	.														T	T	T	S		T	T	S						S	S			T	T	T						T	S	T	T								G	G	G	G	S									T
Template Predicted Secondary structure															.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions