Job Description P30137 Confidence 97.79% Date Thu Jan 5 11:45:54 GMT 2012 Rank 139 Aligned Residues 178 % Identity 20% Template c2gq8A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:oxidoreductase, fmn-binding; PDBTitle: structure of sye1, an oye homologue from s. ondeidensis, in complex2 with p-hydroxyacetophenone Resolution 1.70 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.
Predicted Secondary structure																																			.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	D	F	P	P	V	P	F	R	S	G	L	Y	P	V	V	D	S	V	Q	W	I	E	R	L	L	D	A	G	V	R	T	L	.	Q	L	R	I	K	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																			.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	G	Y	A	W	T	P	G	I	Y	T	P	E	Q	I	A	G	W	R	I	V	T	E	A	V	H	A	K	G	C	A	I	F	A	Q	L	W	H	V	G	R	V	T	H	P	D	N	I	D	G	Q	Q	P	I	S	S	S	T	L	K	A	E	N	V	K	V	F	V	D	N	G	S	D	E	P	G	F	V	D	V
Template Known Secondary structure				S	T	T			B	S	S	S																	T	S											T	T	S	S		G	G	G	T	T	T						S	S	S				T	T								S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
							43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure		.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	R	R	D	E	E	V	E	A	D	V	V	A	A	I	A	L	G	R	R	Y	N	A	R	L	F	I	N	D	Y	W	R	L	A	I	K	H	Q	A	Y	G	V	H	L	G	Q	E	D	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	P	R	A	M	T	K	A	D	I	A	Q	V	I	A	D	Y	R	Q	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	A	M	E	A	G	F	D	G	I	E	L	H	A	A	N	G	Y	L	I	N	Q	F	I	D	S	E	A	N	N	R	S	D	E	Y	G	G	S	L	E	N	R	L	R
Template Known Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.						T	T		S								T	T	S							S	G	G	G					S	T	T	S	S	S					T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.														.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
						91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.																	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	Q	A	T	D	L	N	A	I	R	A	A	G	L	R	L	G	V	S	T	H	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	E	I	D	V	A	L	A	A	R	P	S	Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L	E	Q	L	A
Query Conservation		.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation																			.																																											.	.	.	.	.	.
Template Sequence		F	L	D	E	V	V	A	A	L	V	D	A	I	G	A	E	R	.	V	G	V	R	L	A	P	L	T	T	L	N	G	T	V	D	A	D	P	I	L	T	Y	T	A	A	A	A	L	L	N	K	H	R	I	V	Y	L	H	I	A	E	.	.	.	.	.	.	V	D	W	D	D	A	P	D	T	P	V	S	F	K
Template Known Secondary structure																G	G	G	.							S	S			T	T	S				S	S																T		S							.	.	.	.	.	.		B	T	T	B
Template Predicted Secondary structure																			.																																											.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.							.	.	.	.	.	.	.	.	280	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		R	H	V	E	R	L	A	D	Y	P	T	V	A	I	G	G	I	S	L	A	R	A	P	A	V	I	A	T	G	.	V	G	S	I	A	V	V	S	A	I	T	Q	A	A	D	W	R	L	A	T	A	Q
Query Conservation																															.
Alig confidence																															.
Template Conservation
Template Sequence		R	A	L	R	E	A	Y	Q	G	V	L	I	Y	A	G	R	Y	N	A	E	K	A	E	Q	A	I	N	D	G	L	A	D	M	I	G	F	G	R	P	F	I	A	N	P	D	L	P	E	R	L	R	H
Template Known Secondary structure										S						S	S												T	T	S		S												T	T
Template Predicted Secondary structure
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions