Job Description P30137 Confidence 93.75% Date Thu Jan 5 11:45:54 GMT 2012 Rank 241 Aligned Residues 184 % Identity 17% Template c2d69B_ PDB info PDB header:lyase Chain: B: PDB Molecule:ribulose bisphosphate carboxylase; PDBTitle: crystal structure of the complex of sulfate ion and octameric2 ribulose-1,5-bisphosphate carboxylase/oxygenase (rubisco) from3 pyrococcus horikoshii ot3 (form-2 crystal) Resolution 1.90 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.							.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.												.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	W	I	E	R	L	L	D	A	G	V	R	T	L	Q	L	R	I	K	D	R	R	.	.	.	.	.	.	D	E	E	V	E	A	D	V	V	A	A	I	A	L	G	R	R	Y	N	A	R	L	F	.	.	.	.	.	.	.	.	.	.	.	I	N	D	Y	W	R	L	A	I	K	H	Q	A	Y	G	V	H
Query Conservation																									.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	E	I	A	Y	E	L	W	S	G	G	I	D	L	L	K	D	D	E	N	F	T	S	F	P	F	N	R	F	E	E	R	V	R	K	L	Y	R	V	R	D	R	V	E	A	E	T	G	E	T	K	E	Y	L	I	N	I	T	G	P	V	N	I	M	E	K	R	A	E	M	V	A	N	E	G	G	Q	Y	V	M
Template Known Secondary structure												T		S						T	T				B	T	T	B																					S	S							B			S	S														T	T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	Q	E	D	L	Q	A	T	D	L	N	A	I	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	L	R	L	G	V	S	T	H	D	D	M	E	I	D	V	A	L	A	A	R	P	S	Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.
Template Conservation																																															.	.
Template Sequence		I	D	I	V	V	A	G	W	S	A	L	Q	Y	M	R	E	V	T	E	D	L	G	L	A	I	H	A	H	R	A	M	H	A	A	F	T	R	N	P	R	H	G	I	T	M	.	.	L	A	L	A	K	A	A	R	M	I	G	V	D	Q	I	H	T	G	T	A	V	G	K	M	A	G	N	Y	E	E	I	K	R
Template Known Secondary structure																							T								T	T	T					S		T	T	S					.	.											T		S									S	S
Template Predicted Secondary structure																																															.	.
Template SS confidence
		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																				.					.													.
Query SS confidence																																				.					.													.
Query Sequence		G	L	E	Q	L	A	R	H	V	E	R	L	A	D	Y	P	T	V	A	I	G	G	I	S	L	A	R	A	P	A	V	I	A	T	.	G	V	G	S	.	I	A	V	V	S	A	I	T	Q	A	A	D	.	W	R	L	A	T	A	Q	L	L	E	I	A	G
Query Conservation																																				.					.													.
Alig confidence																																				.					.													.
Template Conservation
Template Sequence		I	N	D	F	L	L	S	K	W	E	H	I	R	P	V	F	P	V	A	S	G	G	L	H	P	G	L	M	P	E	L	I	R	L	F	G	K	D	L	V	I	Q	A	G	G	G	V	M	G	H	P	D	G	P	R	A	G	A	K	A	L	R	D	A	I	D
Template Known Secondary structure								S		B	T	T	B									S	S			G	G	G										S	S											T		T	T
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions