Job Description P30137 Confidence 74.98% Date Thu Jan 5 11:45:54 GMT 2012 Rank 353 Aligned Residues 176 % Identity 15% Template c1zcoA_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase; PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.						.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.
Predicted Secondary structure																.	.	.																.											.	.	.	.	.																								.	.	.	.
Query SS confidence																.	.	.																.											.	.	.	.	.																								.	.	.	.
Query Sequence		P	V	P	F	R	S	G	L	Y	P	V	V	D	S	.	.	.	V	Q	W	I	E	R	L	L	D	A	G	V	R	T	L	.	Q	L	R	I	K	D	R	R	D	E	.	.	.	.	.	E	V	E	A	D	V	V	A	A	I	A	L	G	R	R	Y	N	A	R	L	F	I	N	.	.	.	.	D	Y	W	R	L
Query Conservation																.	.	.																.											.	.	.	.	.																								.	.	.	.
Alig confidence																.	.	.																.											.	.	.	.	.																								.	.	.	.
Template Conservation
Template Sequence		G	F	T	I	I	A	G	P	C	S	I	E	S	R	E	Q	I	M	K	V	A	E	F	L	A	E	V	G	I	K	V	L	R	G	G	A	F	K	P	R	T	S	P	Y	S	F	Q	G	Y	G	E	K	A	L	R	W	M	R	E	A	A	D	E	Y	G	L	V	T	V	T	E	V	M	D	T	R	H	V	E	L
Template Known Secondary structure		S								S	B																	T	T							B	S	S				S	S	T	T	S					T															T										G	G	G
Template Predicted Secondary structure
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110				.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure																	.																						.	.	.												.	.	.	.
Query SS confidence																	.																						.	.	.												.	.	.	.
Query Sequence		A	I	K	H	Q	A	Y	G	V	H	L	G	Q	E	D	.	L	Q	A	T	D	L	N	A	I	R	A	A	G	L	R	L	G	V	S	T	H	.	.	.	D	D	M	E	I	D	V	A	L	A	A	.	.	.	.	R	P	S	Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L
Query Conservation																	.																						.	.	.												.	.	.	.
Alig confidence						.											.																						.	.	.												.	.	.	.
Template Conservation						.
Template Sequence		V	A	K	Y	.	S	D	I	L	Q	I	G	A	R	N	S	Q	N	F	E	L	L	K	E	V	G	K	V	E	N	P	V	L	L	K	R	G	M	G	N	T	I	Q	E	L	L	Y	S	A	E	Y	I	M	A	Q	G	N	E	N	V	I	L	C	E	R	G	I	R	T	F	E	T	A	T	R	F	T	L	D	I
Template Known Secondary structure						.		S						G	G	G	T	T									T	T	S	S	S								T	T															T	T	T											B			S			S	S	S	S	B			T
Template Predicted Secondary structure						.
Template SS confidence
		103	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.								.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.
Query Sequence		E	Q	L	A	R	H	V	E	R	L	A	D	Y	P	T	V	A	I	G	G	I	S	.	.	.	.	.	.	.	L	A	R	A	P	A	V	I	A	T	G	V	G	S	I	A	V
Query Conservation																								.	.	.	.	.	.	.
Alig confidence					.																			.	.	.	.	.	.	.
Template Conservation					.
Template Sequence		S	A	V	.	P	V	V	K	E	L	S	H	L	P	I	I	V	D	P	S	H	P	A	G	R	R	S	L	V	I	P	L	A	K	A	A	Y	A	I	G	A	D	G	I	M	V
Template Known Secondary structure		T			.							B	S	S						S	S	T	T	T		S	G	G	G											T	T		S
Template Predicted Secondary structure					.
Template SS confidence
		182	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions