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Job DescriptionP30137
Confidence72.21%DateThu Jan 5 11:45:54 GMT 2012
Rank362Aligned Residues138
% Identity11%Templatec1vliA_
PDB info PDB header:biosynthetic proteinChain: A: PDB Molecule:spore coat polysaccharide biosynthesis protein spse; PDBTitle: crystal structure of spore coat polysaccharide biosynthesis protein2 spse (bsu37870) from bacillus subtilis at 2.38 a resolution
Resolution2.38 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30........ .40.........50 .........60.........70. ........80
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Query Sequence  VQWIERLLDAGVRTLQL. . . . . . . . . . RIKDRRDEEVEA. . . . . . . DVVAAIALGRRYNARLFINDY. . . . WRLAIKHQA
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Template Sequence  FALIDAAAEAGADAVKFQXFQADRXYQKDPDVSIFSLVQSXEXPAEWILPLLDYCREKQVIFLSTVCDEGSADLLQSTSP
Template Known Secondary structure  T
S

B
GGGGTS





GGGBSS
GGGTT

B

STT

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   35....40.........50.........60.........70.........80.........90.........100.........110....
 
   81........90. ........100.........110.........120. ........130.........140.........150...
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Query Sequence  YGVHLGQEDLQ. . . ATDLNAIRAAGLRLGVSTHDDMEIDVALAA. . . . RPSYIALGHVFPTQTKQMPSAPQGLEQLARHV
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Template Sequence  SAFKIASYEINHLPLLKYVARLNRPXIFSTAGAEISDVHEAWRTIRAEGNNQIAIXHC. . VAKYPAPPEYSNLSVIPXLA
Template Known Secondary structure  S

GGGTT
TT
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TTT


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   124.....130.........140.........150.........160.........170.........180. ........190.........200.
 
   154.....160.
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Query Sequence  ERLADYPT
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Template Sequence  AAFPEAVI
Template Known Secondary structure  STTS
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   202.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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