Job Description P30137 Confidence 93.01% Date Thu Jan 5 11:45:54 GMT 2012 Rank 254 Aligned Residues 160 % Identity 14% Template c1t5aB_ PDB info PDB header:transferase Chain: B: PDB Molecule:pyruvate kinase, m2 isozyme; PDBTitle: human pyruvate kinase m2 Resolution 2.80 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.									.	.	.	.	.														.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	D	S	V	Q	W	I	E	R	L	L	D	A	G	V	R	T	L	Q	L	R	I	K	D	R	R	D	E	E	V	E	A	D	V	V	A	A	I	A	L	G	R	R	Y	N	.	.	.	.	.	.	.	.	A	R	L	F	I	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	Y	W	R	L	A	I	K
Query Conservation																																															.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	R	S	V	E	T	L	K	E	M	I	K	S	G	M	N	V	A	R	L	N	F	S	H	G	T	H	E	Y	H	A	E	T	I	K	N	V	R	T	A	T	E	S	F	A	S	D	P	I	L	Y	R	P	V	A	V	A	L	D	T	K	G	P	E	I	R	T	G	L	I	K	G	S	G	T	A	E	V	E	L
Template Known Secondary structure		T													T								T	T	S	S																		T	T	T	T		T	T	T													S				B			B	S	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		55	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.													90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		H	Q	A	Y	G	V	H	L	G	Q	E	D	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	A	T	D	L	N	A	I	R	A	A	G	L	R	L	G	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	G	A	T	L	K	I	T	L	D	N	A	Y	M	E	K	C	D	E	N	I	L	W	L	D	Y	K	N	I	C	K	V	V	E	V	G	S	K	I	Y	V	D	D	G	L	I	S	L	Q	V	K	Q	K	G	A	D	F	L	V	T	E	V	E	N	G	G	S	L	G	S	K	K	G	V	N	L	P	G	A
Template Known Secondary structure			T	T									G	G	G	T	T		B	B	T	T				B	S		S	G	G	G	G	T			T	T						T	T	T	T										S	S														S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
									108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.			.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																																																		.								.	.
Query SS confidence		.	.	.	.	.	.	.																																																		.								.	.
Query Sequence		.	.	.	.	.	.	.	S	T	H	D	D	M	E	I	D	V	A	L	A	A	R	P	S	Y	I	A	L	G	H	V	F	P	T	Q	T	K	Q	M	P	S	A	P	Q	G	L	E	Q	L	A	R	H	V	E	R	L	.	A	D	Y	P	T	V	A	.	.	I	G	G	I	S	L	A	R	A	P	A	V	I	A
Query Conservation		.	.	.	.	.	.	.																																																		.								.	.
Alig confidence		.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.																	.								.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	D	L	P	A	V	S	E	K	D	I	Q	D	L	K	F	G	V	E	Q	D	V	D	M	V	F	A	S	F	I	.	.	.	.	.	.	.	.	.	R	K	A	S	D	V	H	E	V	R	K	V	L	G	E	K	G	K	N	I	K	I	I	S	K	I	E	N	H	E	G	V	R	R	F	D	E	I	L	E
Template Known Secondary structure							S	S														T	T		S					T	T		.	.	.	.	.	.	.	.	.		S												T	G	G	G	T	T	S								S						T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.										.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	V	G	S	I	A	V	V	S	A
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		A	.	S	D	G	I	M	V	A	R	G
Template Known Secondary structure			.	S	S
Template Predicted Secondary structure			.
Template SS confidence
		286		.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions