 |
Job Description | P30137 | Confidence | 45.86% | Date | Thu Jan 5 11:45:54 GMT 2012 |
Rank | 439 | Aligned Residues | 93 |
% Identity | 12% | Template | c1k98A_ |
PDB info |
PDB header:transferase | Chain: A: PDB Molecule:methionine synthase; |
PDBTitle: adomet complex of meth c-terminal fragment
|
Resolution | 3.75 Å |
|
 |
  |   |
105 | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | V | S | T | H | D | D | M | E | I | D | V | A | L | A | A | R | P | S | Y | I | A | L | G | H | V | F | P | T | Q | T | K | Q | M | P | S | A | P | Q | G | L | E | Q | L | A | R | H | V | E | R | L | A | D | Y | P | T | V | A | I | G | G | I | S | L | A | R | A | P | A | V | I | A | T | G | V | G | S | I | A |
Query Conservation |   |
|
|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   |
|
|
|
|
|   |   |   |
|   |
|   |
|   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |   |   |
|
|   |   |
|   |   |   |
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
Template Conservation |   |
|
|   |
|
|
|   |
|   |
|
|
|
|
|   |   |   |   |
|
|
|
|
|
|
|
|
|
|
|   |
|   |   |   |
| . | . | . | . | . | . |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |
| . | . | . |
Template Sequence |   |
L | G | V | M | V | P | A | E | K | I | L | R | T | A | K | E | V | N | A | D | L | I | G | L | S | G | L | I | T | P | S | L | D | E | M | . |
. |
. |
. |
. |
. |
V | N | V | A | K | E | M | E | R | Q | G | F | T | I | P | L | L | I | G | G | A | T | T | S | K | A | H | T | A | V | K | I | E | Q | N | Y | . |
. |
. |
Template Known Secondary structure |   |
 |  |  | S |
|
|  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |  |
| S |  |  |  |  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
|  |  |  |  |  | S | S |
|
|  |  |  |  |  |  |  | T | G | G | G |
| . | . | . |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|  |  |  |  | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | |
|
|
|
|
|
. | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 | . | . | . | . | . | . | . | . | . | 850 | |
|
|
  |
  |   |
185 | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | S | A | I | T | Q | A | A | D | W | R | L | A | T | A | Q | L | L | E | I | A | G |
Query Conservation |   |
|   |
|
|
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |
|   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |
|   |   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |
|   |   |
Template Sequence |   |
. |
S | G | P | T | V | Y | V | Q | N | A | S | R | T | V | G | V | V | A | A | L | L | S |
Template Known Secondary structure |   |
. | S | S |
|  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
. |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
851 | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|