Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFJ7
Confidence8.32%DateThu Jan 5 11:26:31 GMT 2012
Rank17Aligned Residues22
% Identity27%Templated2axtj1
SCOP infoSingle transmembrane helix Photosystem II reaction center protein J, PsbJ PsbJ-like
Resolution3.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   381........390. ........400..
Predicted Secondary structure 


...
Query SS confidence 










. . .










Query Sequence  YAPVWIIMAVA. . . LALGIGTMIGW
Query Conservation    
 


  

...  
  

   
Alig confidence 










...










Template Conservation 




 
    
  

 







Template Sequence  RIPLWIVATVAGMGVIVIVGLFFYG
Template Known Secondary structure 


Template Predicted Secondary structure 

Template SS confidence 
























   7..10.........20.........30.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions