Job Description P0AFJ7 Confidence 3.78% Date Thu Jan 5 11:26:31 GMT 2012 Rank 37 Aligned Residues 27 % Identity 26% Template c2wlvA_ PDB info PDB header:virus protein Chain: A: PDB Molecule:gag polyprotein; PDBTitle: structure of the n-terminal capsid domain of hiv-2 Resolution 1.25 Å

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		454	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.								470	.	.	.	.	.	.	.	.	.	480
Predicted Secondary structure																		.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.
Query Sequence		V	A	G	T	M	V	V	D	G	G	G	L	Q	R	K	T	.	.	.	.	.	.	.	V	T	S	I	L	M	A	W	V	F	T
Query Conservation																		.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	G	T	T	S	T	V	E	E	Q	I	Q	W	M	F	R	P	Q	N	P	V	P	V	G	N	I	Y	R	R	W	I	Q	I
Template Known Secondary structure			T	T	S	S													S	S	S
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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