Job Description P0AFJ7 Confidence 2.81% Date Thu Jan 5 11:26:31 GMT 2012 Rank 63 Aligned Residues 174 % Identity 18% Template c2d57A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:aquaporin-4; PDBTitle: double layered 2d crystal structure of aquaporin-4 (aqp4m23) at 3.2 a2 resolution by electron crystallography Resolution 3.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.
Query SS confidence																																												.	.	.	.	.
Query Sequence		H	L	F	A	G	L	D	L	H	T	G	L	L	L	L	L	A	L	A	F	V	L	F	Y	E	A	I	N	G	F	H	D	T	A	N	A	V	A	T	V	I	Y	.	.	.	.	.	T	R	A	M	R	S	Q	L	A	V	V	M	A	A	V	F	N	F	L	G	V	L	L	G	G	L	S	V	A	Y	A	I	V
Query Conservation																																												.	.	.	.	.
Alig confidence																																												.	.	.	.	.														.
Template Conservation																																																														.
Template Sequence		G	G	S	E	N	P	L	P	V	D	M	V	L	I	S	L	C	F	G	L	S	I	A	T	M	V	Q	C	F	G	H	I	S	G	G	H	I	N	P	A	V	T	V	A	M	V	C	T	R	K	I	S	I	A	K	S	V	F	Y	I	.	T	A	Q	C	L	G	A	I	I	G	A	G	I	L	Y	L	V	T	P
Template Known Secondary structure		S	S	S	S				T																											S			S											S		S										.																			T
Template Predicted Secondary structure																																																														.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		78	.	80	.	.								.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure							.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.
Query Sequence		H	M	L	P	T	.	.	.	.	.	.	.	D	L	L	L	N	M	G	S	S	H	G	L	A	M	V	F	S	M	L	L	A	A	I	I	W	N	L	G	T	W	Y	F	G	L	P	A	S	S	S	H	T	L	I	G	A	I	I	G	I	G	L	T	N	A	L	M	T	G	T	S	V	V	D	A	L	N	I	P
Query Conservation							.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	S	V	V	G	G	L	G	V	T	T	V	H	G	N	L	T	A	G	H	G	L	L	V	E	L	I	I	T	F	Q	L	V	F	T	I	F	A	S	C	D	S	K	R	T	D	V	T	G	S	V	A	L	A	I	G	F	S	V	A	I	G	H	L	F	A	I	N	Y	T	G	A	S	M	N	P	A	R	S	F
Template Known Secondary structure		T	T	G	G	G		S	S						S																											S	S	S		S				S
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.
Query Sequence		K	V	L	S	I	F	G	S	L	.	.	.	.	.	.	I	V	S	P	I	V	G	L	V	F	A	G	G	L	I	F	L	L
Query Conservation											.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.
Template Conservation
Template Sequence		G	P	A	V	I	M	G	N	W	E	N	H	W	I	Y	W	V	G	P	I	I	G	A	V	L	A	G	A	L	Y	E	Y	V
Template Known Secondary structure											T	T	T																				T	T
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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