Return to main results Retrieve Phyre Job Id

Job DescriptionP28631
Confidence99.73%DateThu Jan 5 11:45:02 GMT 2012
Rank22Aligned Residues190
% Identity22%Templated1sxjd2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKN
Query Conservation         
   
    
 

 

 
  
 

   
  

  
 
           
  
         
   
       
Alig confidence 


















.






























..................










Template Conservation   
     
   
       .


 

 
 


 

  

            ..................           
Template Sequence  QDHAVTVLKKTLKSANLPH. MLFYGPPGTGKTSTILALTKELYGPDLMKSR. . . . . . . . . . . . . . . . . . ILELNASDERG
Template Known Secondary structure 

TTTT
TT


.
STTSSTTS..................
SSS


Template Predicted Secondary structure 





.














..................




Template SS confidence 















































































   42.......50.........60 .........70.........80.........90. ........100..
 
   87..90......... 100.........110.........120.........130.........140.........150.......
Predicted Secondary structure 


.........























Query SS confidence 












. . . . . . . . .

























































Query Sequence  TLGVDAVREVTEK. . . . . . . . . LNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRS
Query Conservation   
 

 

 
   .........          

 

  

     
 




 



      

 
     

 

 
Alig confidence 












.........

























































Template Conservation                                   
   
                          
               
Template Sequence  ISIVREKVKNFARLTVSKPSKHDLENYPCPPYKIIILDEADSMTADAQSALRRTMETYSGVTRFCLICNYVTRIIDPLAS
Template Known Secondary structure  TTS





TTS


S
TTGGGS
TTTTS
GGGS
Template Predicted Secondary structure 















Template SS confidence 















































































   103......110.........120.........130.........140.........150.........160.........170.........180..
 
   158.160.........170...... ...180.........190.........200.........210.....
Predicted Secondary structure 





.....








Query SS confidence 


















. . . . .






































Query Sequence  RCRLHYLAPPPEQYAVTWL. . . . . SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARET
Query Conservation 
   
             
..... 
           
     
    
   
          
Alig confidence 


















.....






































Template Conservation 
                 
               
  
     

 
  
  
  
   
   
Template Sequence  QCSKFRFKALDASNAIDRLRFISEQENVKCDDGVLERILDISAGDLRRGITLLQSASKGAQYL
Template Known Secondary structure  S




TTT



TSS
T
Template Predicted Secondary structure 

















Template SS confidence 






























































   183......190.........200.........210.........220.........230.........240.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions