Return to main results Retrieve Phyre Job Id

Job DescriptionP28631
Confidence99.87%DateThu Jan 5 11:45:02 GMT 2012
Rank16Aligned Residues205
% Identity22%Templated1sxjb2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1..... ...10.........20.........30.........40.........50.........60......
Predicted Secondary structure 





..............


























Query SS confidence 





. . . . . . . . . . . . . .



























































Query Sequence  MRWYPW. . . . . . . . . . . . . . LRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQ
Query Conservation      

..............       
   
    
 

 

 
  
 

   
  

  
 
           
  
 
Alig confidence 


.

..............


















.





























..........
Template Conservation     . 
  

 
    



       
   
       . 

 

 
 


 

  

           ..........
Template Sequence  LQL. PWVEKYRPQVLSDIVGNKETIDRLQQIAKDGNMPH. MIISGMPGIGKTTSVHCLAHELLGRSYADG. . . . . . . . . .
Template Known Secondary structure 


.
T

SSGGG

S
TS




.
STTSSGGG..........
Template Predicted Secondary structure 


.












.













..........
Template SS confidence 















































































   7.. 10.........20.........30.........40.... .....50.........60.........70....
 
   67..70.........80.........90.........100.........110.........120.........130.........140......
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  LMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATR
Query Conservation          
   
        
 

 

 
             

 

  

     
 




 



      

 
 
Alig confidence  .........






































































Template Conservation  .........                                      

                          
    
Template Sequence  . . . . . . . . . VLELNASDDRGIDVVRNQIKHFAQKKLHLPPGKHKIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACN
Template Known Secondary structure  .........
TTS

ST





TT

SGGGS
TTTTTTS
Template Predicted Secondary structure  .........





























Template SS confidence 















































































   75....80.........90.........100.........110.........120.........130.........140.....
 
   147..150.........160.........170...... ...180.........190.........200.........210.........220.
Predicted Secondary structure 









.....








Query SS confidence 





























. . . . .












































Query Sequence  EPERLLATLRSRCRLHYLAPPPEQYAVTWL. . . . . SREVTMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALA
Query Conservation      

 

 

   
             
..... 
           
     
    
   
              
 
Alig confidence 





























.....












































Template Conservation             
                

  
   
        
  
   
 

 
 

  
         
    
 
Template Sequence  QSNKIIEPLQSQCAILRYSKLSDEDVLKRLLQIIKLEDVKYTNDGLEAIIFTAEGDMRQAINNLQSTVAGHGLVNADNVF
Template Known Secondary structure 
GGGS
TTS




T

B
TT
SSB
Template Predicted Secondary structure 


























Template SS confidence 















































































   146...150.........160.........170.........180.........190.........200.........210.........220.....
 
   222....
Predicted Secondary structure 

Query SS confidence 




Query Sequence  YSVPS
Query Conservation       
Alig confidence 




Template Conservation   
  
Template Sequence  KIVDS
Template Known Secondary structure  T
Template Predicted Secondary structure 

Template SS confidence 




   226...230
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions