|   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | W | Y | P | W | L | R | P | D | F | E | K | L | V | A | S | Y | Q | A | G | R | G | H | H | A | L | L | I | Q | A | L | P | G | M | G | D | D | A | L | I | Y | A | L | S | R | Y | L | L | C | Q | Q | P | Q | G | H | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | C | G | H | C | R | G | C | Q | L | M | Q | A | G |
Query Conservation |   |
  |   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|   |
|
|   |
|
|   |
|   |   |
|   |
|
|   |   |   |
|   |   |
|
|   |   |
|   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |
|
|   |   |
|
|   | . | . | . | . | . | . | . |
|   |
|
|
|
|   |
|   |
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
K | P | S | P | I | Q | E | E | A | I | P | V | A | I | T | . |
. |
. |
. |
. |
. |
. |
G | R | D | I | L | A | R | A | K | N | G | T | G | K | T | A | A | F | V | I | P | T | L | E | K | V | K | P | K | L | N | K | I | Q | A | L | I | M | V | P | T | R | E | L | A | L | Q | T | S | Q | V | V | R | T | L | G | K | H |
Template Known Secondary structure |   |
S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | T |
|
|  |  |  |  |
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| T | T | S |
| S |
|
|  |  |  |  |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
68 | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
  |
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | |
. | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | H | P | D | Y | Y | T | L | A | P | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
K | G | K | N | T | L | G | V | D | A | V | R | E | V | T | E | K | L | N | E | H | A | R | L | . |
G | G | A | K | V | V | W | V | T | D | A | A | L | L | T | D | A | . |
A | A | N | A | L | L | K | T | L | E | E | P | P | A | E | T |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   | . |   |   |   |
|
|   |
|
|   |   |
|
|   |   |   |   |   | . |
|   |
|
|
|
|
|   |
|
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
C | G | I | S | C | M | V | T | T | G | G | T | N | L | R | D | D | I | L | R | L | N | E | T | V | H | I | L | V | G | T | P | G | R | V | L | D | L | A | S | R | K | V | A | D | L | S | D | C | S | L | F | I | M | D | E | A | D | K | M | L | S | R | D | F | K | T | I | I | E | Q | I | L | S | F | L | P | P | T | H |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  | T | T | S |
|
| S |  |  |  |  |
|  |  |  |  |  |  |  |  |  | T | T |
| S |
|
| T | T |
|
|  |  |  |  |  | S |  |  |  |  | S | S |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| S | S |
|
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
141 | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 |
  |
  |   |
140 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
W | F | F | L | A | T |
Query Conservation |   |
  |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |   |
|
Template Sequence |   |
Q | S | L | L | F | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
221 | . | . | . | . | . |
  |