Return to main results Retrieve Phyre Job Id

Job DescriptionP28631
Confidence99.45%DateThu Jan 5 11:45:02 GMT 2012
Rank49Aligned Residues193
% Identity16%Templated1r6bx2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.25

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  YPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEK
Query Conservation   

       
   
    
 

 

 
  
 

   
  

  
 
           
  
         
   
    
Alig confidence 





















.
































................







Template Conservation 



   
  
   
       .


 







  
  

  
           ................        
Template Sequence  LIGREKELERAIQVLCRRRKNN. PLLVGESGVGKTAIAEGLAWRIVQGDVPEVMAD. . . . . . . . . . . . . . . . CTIYSLDI
Template Known Secondary structure 

S
TSSSS
.

TTSST
S
GGGTT................



Template Predicted Secondary structure 









.















................
Template SS confidence 















































































   188.190.........200......... 210.........220.........230.........240.. .......250
 
   84.....90.........100.........110.........120 .........130.........140.........150.
Predicted Secondary structure 


















........








....
Query SS confidence 




































. . . . . . . .






























. . . .
Query Sequence  GKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALL. . . . . . . . TDAAANALLKTLEEPPAETWFFLATREPERL. . . .
Query Conservation      
 

 

 
             

 

  

  ........   
 




 



      

 
     
....
Alig confidence 




































........






























....
Template Conservation                             

 


   
                
           
              
Template Sequence  GAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEK
Template Known Secondary structure 





SS
SSSS
TTTTTTTTS

SSS
SS
SSS








Template Predicted Secondary structure 
























Template SS confidence 















































































   251........260.........270.........280.........290.........300.........310.........320.........330
 
   152.......160.........170...... ...180.........190.... .....200.........210...
Predicted Secondary structure 







.........





......


Query SS confidence 
























. . . . . . . . .

















. . . . . .


















Query Sequence  LATLRSRCRLHYLAPPPEQYAVTWL. . . . . . . . . SREVTMSQDALLAALRLS. . . . . . AGSPGAALALFQGDNWQAR
Query Conservation 
 

 

   
             
......... 
           
    ...... 
    
   
        
Alig confidence 
























.........

















......


















Template Conservation       
    
            

              
       
  

            

 

  
     
Template Sequence  DRALARRFQKIDITEPSIEETVQIINGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARAR
Template Known Secondary structure  TTSSGGG




T




TTS
TT
Template Predicted Secondary structure 

























Template SS confidence 












































































   334.....340.........350.........360.........370.........380.........390.........400.........410
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions