Return to main results Retrieve Phyre Job Id

Job DescriptionP28631
Confidence99.34%DateThu Jan 5 11:45:02 GMT 2012
Rank60Aligned Residues171
% Identity11%Templated1ofha_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.5

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10........ .20.........30.........40.........50.........60.........70..
Predicted Secondary structure 

.............




























Query SS confidence 












. . . . . . . . . . . . .





















































Query Sequence  WLRPDFEKLVASY. . . . . . . . . . . . . QAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGT
Query Conservation 
       
   
.............    
 

 

 
  
 

   
  

  
 
           
  
       
Alig confidence 












.............








































.............
Template Conservation 

  
   
   
                     


 







 


 

  
           .............
Template Sequence  GQADAKRAVAIALRNRWRRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATK. . . . . . . . . . . . .
Template Known Secondary structure  S
TTSS







TTSST

GGG.............
Template Predicted Secondary structure 






















.............
Template SS confidence 















































































   1920.........30.........40.........50.........60.........70.........80.....
 
   73......80.........90.........100....... ..110.........120. ........130....
Predicted Secondary structure 















.








............
.....
Query SS confidence 


































.













. . . . . . . . . . . .












. . . . .
Query Sequence  HPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLG. GAKVVWVTDAALLT. . . . . . . . . . . . DAAANALLKTLEE. . . . .
Query Conservation    
   
        
 

 

 
           .  

 

  

   ............  
 




 


.....
Alig confidence  ......




























.













............












.....
Template Conservation  ......                                 
   

                       

  

      
Template Sequence  . . . . . . FTEVGYVGKEVDSIIRDLTDSAGGAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVST
Template Known Secondary structure  ......GSS

SGGGSTTTTTT


GGGGS

SS

SS

Template Predicted Secondary structure  ......























Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........
 
   135....140....... ..150......... 160.........170.........180.........190.....
Predicted Secondary structure  .....





....




.










Query SS confidence  . . . . .












. . . .











.



































Query Sequence  . . . . . PPAETWFFLATRE. . . . PERLLATLRSRC. RLHYLAPPPEQYAVTWLSREVTMSQDALLAALRLSA
Query Conservation  .....
      

 
  ....   

 

 

 .  
             
 
           
     
Alig confidence  .....












....











.



































Template Conservation           
  
                   
                 
       
            
Template Sequence  KHGMVKTDHILFIASGAFQVARPSDLIPELQGRLPIRVELTALSAADFERILTEPHASLTEQYKALMATEG
Template Known Secondary structure  TT
TT


SSS
GGGS
T






SSTT
TT
Template Predicted Secondary structure 





























Template SS confidence 






































































   294.....300.........310.........320.........330.........340.........350.........360....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions