Return to main results Retrieve Phyre Job Id

Job DescriptionP28631
Confidence95.71%DateThu Jan 5 11:45:02 GMT 2012
Rank263Aligned Residues148
% Identity13%Templated1gkya_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30.........40.........50.........60.........70.........80.........90.........100...
Predicted Secondary structure 




































Query SS confidence 















































































Query Sequence  HHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEH
Query Conservation   

 

 
  
 

   
  

  
 
           
  
         
   
        
 

 

 
       
Alig confidence 

























...................


































Template Conservation   
 


 

 






   
     ...................              
                
   
Template Sequence  SRPIVISGPSGTGKSTLLKKLFAEYP. . . . . . . . . . . . . . . . . . . DSFGFSVSSTTRTPRAGEVNGKDYNFVSVDEFKSM
Template Known Secondary structure 




TTSS
T...................TT


S


TT

BTTT

Template Predicted Secondary structure 









...................

















Template SS confidence 















































































   1........10.........20...... ...30.........40.........50.........60.
 
   104.....110.........120.........130.........140.........150.........160.........170.........180...
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  ARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREVTMS
Query Conservation        

 

  

     
 




 



      

 
     

 

 

   
             
 
     
Alig confidence 



















..

























































Template Conservation                      ..              
          
          
         
  

  
    
Template Sequence  IKNNEFIEWAQFSGNYYGST. . VASVKQVSKSGKTCILDIDMQGVKSVKAIPELNARFLFIAPPSVEDLKKRLEGRGTET
Template Known Secondary structure  TT
TT..TS

T
GGG


S
S
S
Template Predicted Secondary structure 








..


















Template SS confidence 















































































   62.......70.........80. ........90.........100.........110.........120.........130.........
 
   184.....190..
Predicted Secondary structure 
Query SS confidence 








Query Sequence  QDALLAALR
Query Conservation        
  
Alig confidence 








Template Conservation     
   
 
Template Sequence  EESINKRLS
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 








   140........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions