Job Description P28631 Confidence 96.56% Date Thu Jan 5 11:45:02 GMT 2012 Rank 176 Aligned Residues 133 % Identity 12% Template c4a4zA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:antiviral helicase ski2; PDBTitle: crystal structure of the s. cerevisiae dexh helicase ski2 bound to2 amppnp Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.				.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.
Query SS confidence																																																																		.	.	.
Query Sequence		W	Y	P	W	L	R	P	D	F	E	K	L	V	A	S	Y	Q	A	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	.	.	.	L	M	Q	A	G	T	H	P	D	Y	Y	T	L
Query Conservation																																																																		.	.	.
Alig confidence																	.	.	.	.	.	.	.																																											.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		L	D	T	F	Q	K	E	A	V	Y	H	L	E	Q	G	.	.	.	.	.	.	.	D	S	V	F	V	A	A	H	T	S	A	G	K	T	V	V	A	E	Y	A	I	A	M	A	H	R	N	M	T	K	T	I	Y	T	S	P	I	K	A	L	S	N	Q	K	F	R	D	F	K	E	T	F	V	N	I	G	L	I
Template Known Secondary structure															T	T	.	.	.	.	.	.	.									T	T	S		S														T	T								S		G	G	G										T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.								.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		80	.	.				.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure					.	.	.																										.																	.	.	.	.
Query SS confidence					.	.	.																										.																	.	.	.	.
Query Sequence		A	P	E	.	.	.	K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	A	R	L	G	.	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	.	.	.	.	A	A	N	A	L	L	K	T	L	E	E	P	P	A	E	T	W	F	F	L	A	T
Query Conservation					.	.	.																										.																	.	.	.	.
Alig confidence					.	.	.																										.																	.	.	.	.										.	.	.
Template Conservation																																																															.	.	.
Template Sequence		T	G	D	V	Q	I	N	P	D	A	N	C	L	I	M	T	T	E	I	L	R	S	M	L	Y	R	G	A	D	L	I	R	D	V	E	F	V	I	F	D	E	V	H	Y	V	N	D	Q	D	R	G	V	V	W	E	E	V	I	I	M	L	.	.	.	P	Q	H	V	K	F	I	L	L	S
Template Known Secondary structure			S	S					T	T	S	S																T		S	G	G	G	G									T	T				T	T		T	T										S	.	.	.		T	T
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.				.	.	.	.	470	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions