Job Description P28631 Confidence 99.48% Date Thu Jan 5 11:45:02 GMT 2012 Rank 45 Aligned Residues 182 % Identity 14% Template c3pxiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca108:clpc Resolution 6.93 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.									.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.
Query Sequence		P	W	L	R	P	D	F	E	K	L	V	A	S	Y	Q	A	G	R	G	H	H	A	.	.	.	.	.	.	.	.	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	G	T	H	P	D	Y
Query Conservation																								.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	Q	D	E	A	V	V	A	V	A	K	A	V	R	R	A	R	A	G	L	K	D	P	K	R	P	I	G	S	F	I	F	L	G	P	T	G	V	G	K	T	E	L	A	R	A	L	A	E	S	I	F	G	D	E	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M
Template Known Secondary structure			S																T	T	T		S		T	T	S		S							S		T	T	S	S														S		T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.																						.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.							.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																																												.	.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.	.
Query Sequence		Y	T	L	A	P	E	K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	A	A	N	A	L	L	K	T	L	E	E	.	.	.	.	.	.	P	P	A	E	T	W	F	F	L	A	T	R	E	P	E	R
Query Conservation																																																												.	.	.	.	.	.
Alig confidence																	.	.	.	.										.	.	.	.																											.	.	.	.	.	.
Template Conservation																	.	.	.	.										.	.	.	.
Template Sequence		I	R	I	D	M	S	E	Y	M	E	K	H	S	T	S	.	.	.	.	L	T	E	K	V	R	R	K	P	.	.	.	.	Y	S	V	V	L	L	D	A	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	L	E	D	G	R	L	T	T	V	D	F	R	N	T	I	L	I	M	T	S	N	V	G	A	S
Template Known Secondary structure						G	G	G	G		S	S					.	.	.	.									S	.	.	.	.	S	S							G	G	G	S															S	B					B		T	T								S	S	S	T	T
Template Predicted Secondary structure																	.	.	.	.										.	.	.	.
Template SS confidence
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.					.	.	.	.	.	590	.	.	.					.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
		151	.	.	.	.	.													.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.															.	180	.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.				.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.				.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		L	L	A	T	L	R	.	.	.	.	.	.	.	.	.	.	.	.	S	R	C	.	R	L	H	Y	L	A	P	P	P	E	Q	Y	A	V	T	W	L	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	V	T	M	S	Q	D	A	L	L	A	A	L	R	L	.	.	.	S	A	G	S	P	G	A
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.				.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.				.									.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation																																.	.
Template Sequence		E	K	D	K	V	M	G	E	L	K	R	A	F	R	P	E	F	I	N	R	I	D	E	I	I	V	F	H	E	K	.	.	K	H	L	T	E	I	V	S	L	M	S	D	Q	L	T	K	R	L	K	E	Q	D	L	S	I	E	L	T	D	A	A	K	A	K	V	A	E	E	G	V	D	L	E	Y	G	A	R	P
Template Known Secondary structure														S						T	T	S	S									.	.																				T	T	T															G	G	G			T	T	T	T	T	T	T
Template Predicted Secondary structure																																.	.
Template SS confidence
		664	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.			.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	L	F	Q	G	D	N	W	Q	A	R	E	T	L	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	R	A	I	Q	K	H	V	E	D	R	L	S	E	E	L
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		765	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions