Job Description P28631 Confidence 98.98% Date Thu Jan 5 11:45:02 GMT 2012 Rank 77 Aligned Residues 163 % Identity 23% Template c3pxgA_ PDB info PDB header:protein binding Chain: A: PDB Molecule:negative regulator of genetic competence clpc/mecb; PDBTitle: structure of meca121 and clpc1-485 complex Resolution 3.65 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	D	F	E	K	L	V	A	S	Y	Q	A	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	G	T	H	P	D	Y	Y	T	L	A	P	E	K	G	K	N	T
Query Conservation
Alig confidence																				.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Conservation																				.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template Sequence		S	K	E	I	Q	R	V	I	E	V	L	S	R	R	T	K	N	N	.	P	V	L	I	G	E	P	G	V	G	K	T	A	I	A	E	G	L	A	Q	Q	I	I	N	N	E	V	P	E	I	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	K	R	V	M	T	L	E	D	R	.	.	.
Template Known Secondary structure															S	S	S			.					S		T	T	T	T	T													S	S		S		T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S								T	T	.	.	.
Template Predicted Secondary structure																				.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.																	.	.	.	.	.	240	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																																																																	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.
Query Sequence		L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	A	A	N	A	L	L	K	T	L	E	E	P	P	A	E	T	W	F	F	L	A	T	R	E	P	E	R	.	.	.	.	.	L	L	A	T	L	R	S	R	C	R	L	H
Query Conservation																																																																	.	.	.	.	.
Alig confidence		.	.	.	.	.													.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation		.	.	.	.	.													.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	L	K	K	V	M	D	E	I	R	Q	A	G	.	.	.	.	N	I	I	L	F	I	D	A	K	P	S	L	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	E	L	Q	C	I	G	A	T	T	L	D	E	Y	R	K	Y	I	E	K	D	A	A	L	E	R	R	F	Q	P	I
Template Known Secondary structure		.	.	.	.	.										T			.	.	.	.												T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	S									T	T	T	T					T	T		S					S
Template Predicted Secondary structure		.	.	.	.	.													.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
							261	.	.	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.															.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.										.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.							.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Query Sequence		Y	L	A	P	P	P	E	Q	Y	A	V	T	W	L	.	.	.	.	.	.	.	.	.	S	R	E	V	T	M	S	Q	D	A	L	L	A	A	L	R	L	S	A	.	.	.	.	.	.	G	S	P	G	A	A	L	A	L	F	Q	G	D	N	W	Q	A	R
Query Conservation																.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	D	Q	P	S	V	D	E	S	I	Q	I	L	Q	G	L	R	D	R	Y	E	A	H	H	R	V	S	I	T	D	D	A	I	E	A	A	V	K	L	S	D	R	Y	I	S	D	R	F	L	P	D	K	A	I	D	L	I	D	E	A	G	S	K	V	R
Template Known Secondary structure																		T	T	T	T	S	G	G	G	S	S		S																S	S			S		T	T
Template Predicted Secondary structure
Template SS confidence
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions