Job Description P28631 Confidence 99.91% Date Thu Jan 5 11:45:02 GMT 2012 Rank 13 Aligned Residues 291 % Identity 18% Template c3pvsA_ PDB info PDB header:recombination Chain: A: PDB Molecule:replication-associated recombination protein a; PDBTitle: structure and biochemical activities of escherichia coli mgsa Resolution 2.50 Å

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		7	.	.	10	.	.	.				.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure									.	.	.
Query SS confidence									.	.	.
Query Sequence		L	R	P	D	F	E	K	.	.	.	L	V	A	S	Y	Q	A	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	G	T	H	P	D	Y	Y	T	L	A	P	E	K
Query Conservation									.	.	.
Alig confidence									.	.	.													.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Template Conservation																								.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Template Sequence		Q	Q	H	L	L	A	A	G	K	P	L	P	R	A	I	E	A	G	H	L	H	S	.	M	I	L	W	G	P	P	G	T	G	K	T	T	L	A	E	V	I	A	R	Y	A	N	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	R	I	.	.	.	.
Template Known Secondary structure							S	T	T	S									T					.						S	T	T	S	S												T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Template Predicted Secondary structure																								.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.																									.	.	80	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	A	A	N	A	L	L	K	T	L	E	E	P	P	A	E	T	W	F	F	L	A	T	R	E	P	E	R	L	L	A	T	L	R	S	R	C	R	L	H	Y
Query Conservation
Alig confidence																																							.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.
Template Sequence		S	A	V	T	S	G	V	K	E	I	R	E	A	I	E	R	A	R	Q	N	R	N	A	G	R	R	T	I	L	F	V	D	E	V	H	R	F	.	.	.	.	.	.	A	F	L	P	H	I	E	D	G	T	I	T	F	I	G	A	T	T	E	N	P	S	F	E	L	N	S	A	L	L	S	R	A	R	V	Y	L
Template Known Secondary structure			T	T	T																			T	T									T	T	T			.	.	.	.	.	.								T	T	S								S	S		G	G	G	S	S						T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.													180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.											.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	P	P	P	E	Q	Y	A	V	T	W	L	S	R	E	.	.	.	.	.	.	.	.	.	.	.	.	V	T	M	S	Q	D	A	L	L	A	A	L	R	L	S	A	G	S	P	G	A	A	L	A	L	F	Q	G	D	N	W	Q	.	.	.	.	.	.	.	.	.	.	A	R	E	T	L	C	Q	A	L	A
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	S	L	S	T	E	D	I	E	Q	V	L	T	Q	A	M	E	D	K	T	R	G	Y	G	G	Q	D	I	V	L	P	D	E	T	R	R	A	I	A	E	L	V	N	G	D	A	R	R	A	L	N	T	L	E	M	M	A	D	M	A	E	V	D	D	S	G	K	R	V	L	K	P	E	L	L	T	E	I	A
Template Known Secondary structure																					T	T	T	S	S	T	T	S	S																	S																S		B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		222	.	.	.	.	.	.								.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.											.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	S	V	P	S	G	D	.	.	.	.	.	.	.	W	Y	S	L	L	A	A	L	N	H	E	Q	A	P	A	R	L	H	W	L	A	T	L	L	.	.	.	.	.	.	.	.	.	.	M	D	A	L	K	R	H	H	G	A	A	Q	V	T	N	V	D	V	P	G	L	V	A	E	L	A	N	H	L	S	P	S
Query Conservation									.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	E	R	S	A	R	K	G	D	R	F	Y	D	L	I	S	A	L	H	K	S	V	R	G	S	A	P	D	A	A	L	Y	W	Y	A	R	I	I	T	A	G	G	D	P	L	Y	V	A	R	R	C	L	A	I	A	S	E	D	V	G	N	A	D	P	R	A	M	Q	V	A	I	A	A	W	D	C	F	T	R	V
Template Known Secondary structure		T																							T	T															T	T																	T	T	G	G	G		T																S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	Q	A	I	L	G	D	V	C	H	I	R	E	Q	L	M	S	V	T	G	I	N	R	E	L	L	I	T	D	L	L	L	R	I	E	H	Y	L	Q	P	G	V	V	L	P	V	P	H	L
Query Conservation
Alig confidence																									.	.
Template Conservation																									.	.
Template Sequence		G	P	A	E	G	E	R	A	I	A	Q	A	I	V	Y	L	A	C	A	P	K	S	N	.	.	A	V	Y	T	A	F	K	A	A	L	A	D	A	R	E	R	P	D	Y	D	V	P	V	H	L
Template Known Secondary structure																				S					.	.																S							G	G	G
Template Predicted Secondary structure																									.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.			.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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