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Job DescriptionP28631
Confidence94.78%DateThu Jan 5 11:45:02 GMT 2012
Rank321Aligned Residues131
% Identity14%Templatec3p1jC_
PDB info PDB header:hydrolaseChain: C: PDB Molecule:gtpase imap family member 2; PDBTitle: crystal structure of human gtpase imap family member 2 in the2 nucleotide-free state
Resolution2.58 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80 .........90.........100.....
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Query Sequence  LLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLA. PEKGKNTLGVDAVREVTEKLNEHAR
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Template Sequence  IILVGKTGTGKSAAGNSILRT. . . . . . . . . . . . . . . . . . CSKSQGSWREIVIIDTPDMFSWKDHCEALYKEVQRCYLLSA
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   25....30.........40..... ....50.........60.........70.........80......
 
   106...110.........120.........130....... ..140........ .150.........160......
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Query Sequence  LGGAKVVWVTDAALLTDAAANALLKTLEEPPA. . . . ETWFFLATREP. . . . . . . . . . . . . . . ERLLATLRSRCRLHYLAP
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Template Sequence  PGPHVLLLVTQLGRYTSQDQQAAQRVKEIFGEDAMGHTIVLFTHKNGGSLMDYMHDSDNKALSKLVAACGGRICAFNNRA
Template Known Secondary structure  T

STTB


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   104.....110.........120.........130.........140.........150.........160.........170.........180...
 
   167..170.....
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Query Sequence  PPEQYAVTW
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Template Sequence  EGSNQDDQV
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T
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   187..190.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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