Job Description P28631 Confidence 95.36% Date Thu Jan 5 11:45:02 GMT 2012 Rank 286 Aligned Residues 137 % Identity 11% Template c3ly5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx18; PDBTitle: ddx18 dead-domain Resolution 2.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.															.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	W	Y	P	W	L	R	P	D	F	E	K	L	V	A	S	Y	Q	A	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	C	Q	L
Query Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		N	M	T	E	I	Q	H	K	S	I	R	P	L	L	E	.	.	.	.	.	.	.	G	R	D	L	L	A	A	A	K	T	G	S	G	K	T	L	A	F	L	I	P	A	V	E	L	I	V	K	L	R	F	M	P	R	N	G	T	G	V	L	I	L	S	P	T	R	E	L	A	M	Q	T	F	G	V	L	K	E
Template Known Secondary structure		B															.	.	.	.	.	.	.	T									T	T	S																	T	T			G	G	G									S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.								.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.											.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.																					.	.																						.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.																					.	.																						.
Query Sequence		M	Q	A	G	T	H	P	D	Y	Y	T	L	A	P	E	.	.	.	.	.	.	.	.	.	.	K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	.	.	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	.	A	A	N	A	L	L	K	T	L	E	E
Query Conservation																	.	.	.	.	.	.	.	.	.	.																					.	.																						.
Alig confidence																	.	.	.	.	.	.	.	.	.	.																					.	.																						.
Template Conservation
Template Sequence		L	M	T	H	H	V	H	T	Y	G	L	I	M	G	G	S	N	R	S	A	E	A	Q	K	L	G	N	G	I	N	I	I	V	A	T	P	G	R	L	L	D	H	M	Q	N	T	P	G	F	M	Y	K	N	L	Q	C	L	V	I	D	E	A	D	R	I	L	D	V	G	F	E	E	E	L	K	Q	I	I	K	L
Template Known Secondary structure			T	T	T			S							S	S	S														S																	T	T				T	T								S							T	T
Template Predicted Secondary structure
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
		135	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	A	E	T	W	F	F	L	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	P	T	R	R	Q	T	M	L	F	S
Template Known Secondary structure		S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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