Job Description P28631 Confidence 93.42% Date Thu Jan 5 11:45:02 GMT 2012 Rank 394 Aligned Residues 145 % Identity 12% Template c2v1xB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent dna helicase q1; PDBTitle: crystal structure of human recq-like dna helicase Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.														.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Query Sequence		Y	P	W	L	R	P	D	F	E	K	L	V	A	S	Y	Q	A	G	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	.
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.																																															.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.																													.
Template Conservation																																																		.	.	.
Template Sequence		F	P	W	S	G	K	V	K	D	I	L	Q	N	V	F	K	L	E	K	F	R	P	L	Q	L	E	T	I	N	V	T	M	A	G	K	E	V	F	L	V	M	P	T	G	G	G	K	S	.	.	.	L	C	Y	Q	L	P	A	L	C	S	D	G	F	T	L	V	I	C	P	L	I	S	L	M	E	D	Q	L	M
Template Known Secondary structure		S	T	T											T	S				S			T	T										T	T									T	T	S			T	.	.	.									S	S	S	S							S
Template Predicted Secondary structure																																																		.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
																																70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	T	H	P	D	Y	Y	T	L	A	P	E	K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.
Template Sequence		V	L	K	Q	L	G	I	S	A	T	M	L	N	A	S	S	S	K	E	H	V	K	W	V	H	A	E	M	V	N	K	N	S	E	L	K	L	I	Y	V	T	P	E	.	.	.	.	.	.	K	I	A	K	S	K	M	F	M	S	R	L	E	K	A	Y	E	A	R	R	F	T	R	I	A	V	D	E	V	H	C
Template Known Secondary structure							T								S	S																T	T										T		.	.	.	.	.	.				S														T	T									T	G	G	G
Template Predicted Secondary structure																																													.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.							.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		120	.							.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.
Query Sequence		L	T	.	.	.	.	.	.	D	A	A	A	N	A	L	L	K	T	L	E	E	P	P	A	E	T	W	F	F	L	A	T	R	E	P	E	R	L	L	A	T	L	R	S
Query Conservation				.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.
Template Conservation
Template Sequence		C	S	Q	W	G	H	D	F	R	P	D	Y	K	A	L	G	I	L	K	R	Q	F	P	N	A	S	L	I	G	L	T	A	T	A	T	N	H	V	L	T	D	A	Q	K
Template Known Secondary structure		G	S	T	T	S	T	T			G	G	G	G	G	G								T	T	S							S	S
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions