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Job DescriptionP28631
Confidence99.48%DateThu Jan 5 11:45:02 GMT 2012
Rank44Aligned Residues175
% Identity15%Templatec2qz4A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:paraplegin; PDBTitle: human paraplegin, aaa domain in complex with adp
Resolution2.22 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10......... 20.........30.........40.........50.........60.........70.........80
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Query Sequence  WLRPDFEKLVASYQ. . . . . AGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLA
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Template Sequence  GMHEAKLEVREFVDYLKSPEAKVPKGALLLGPPGCGKTLLAKAVATEAQVP. . . . . . . . . . . . . . . . . . . . . . . . FLAMA
Template Known Secondary structure  S








S
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   313......320.........330.........340.........350.........360... .....
 
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Query Sequence  PEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRC.
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Template Sequence  GAEFVEVIGGLGAARVRSLFK. EARARAPCIVYIDEIEQTLNQLLVEM. . DGMGTTDHVIVLASTNRADILDGALMRPGR
Template Known Secondary structure  TTTTSSSSTT.T
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GGGGGSGGGSTTS
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   375....380.........390..... ....400.........410.........420. ........430.........440.........450.
 
   160.........170...... ...180...... ...190...... ...200.......
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Query Sequence  . . RLHYLAPPPEQYAVTWL. . . . . SREVTMSQDA. LLAALRLSAG. SPGAALALFQG
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Template Sequence  LDRHVFIDLPTLQERREIFEQHLKSLKLTQSSTFYSQRLAELTPGFSGADIANICNE
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   471........480.........490.........500.........510.........520.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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