Job Description P28631 Confidence 97.78% Date Thu Jan 5 11:45:02 GMT 2012 Rank 106 Aligned Residues 227 % Identity 17% Template c2qenA_ PDB info PDB header:unknown function Chain: A: PDB Molecule:walker-type atpase; PDBTitle: the walker-type atpase paby2304 of pyrococcus abyssi Resolution 2.25 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	D	F	E	K	L	V	A	S	Y	Q	A	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	G	T	H	P	D	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.																													.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.																													.	.	.	.	.	.	.
Template Sequence		E	E	E	S	R	K	L	E	E	S	L	E	N	Y	P	.	.	.	L	T	L	L	L	G	I	R	R	V	G	K	S	S	L	L	R	A	F	L	N	E	R	P	G	I	L	I	.	.	.	.	.	.	.	D	C	R	E	L	Y	A	E	R	G	H	I	T	R	E	E	L	I	K	E	L	Q	S	T	I	S	P
Template Known Secondary structure																S	.	.	.								T	T	S	S												S	S					.	.	.	.	.	.	.								T	T	T		B													S		S
Template Predicted Secondary structure																	.	.	.																													.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
										76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	Y	Y	T	L	A	P	E	K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	.	.	.	.	.	.	L	L	T	D	A	A	A	N	A	L	L	K	T	L	E	E	P	P	A	E	T	W	F
Query Conservation		.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																												.	.	.	.	.	.
Template Conservation
Template Sequence		F	Q	K	F	Q	S	K	F	K	I	S	L	N	L	K	F	L	T	L	E	P	R	K	L	S	L	R	E	V	F	R	E	L	N	D	L	G	E	E	L	G	E	F	I	V	A	F	D	E	A	Q	Y	L	R	F	Y	G	S	R	G	G	K	E	L	L	A	L	F	A	Y	A	Y	D	S	L	P	N	L	K	I
Template Known Secondary structure										T						G	G	G	T	S		G	G	G																		S								T	G	G	G	G	G	G	B	T	T	T	T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.											.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.						.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Query Sequence		F	L	A	T	R	E	P	E	R	L	L	A	T	L	R	S	R	.	.	.	.	.	.	.	.	.	.	C	R	L	H	Y	L	A	P	P	P	E	Q	Y	A	V	T	W	L	S	R	.	.	.	.	.	E	V	T	M	S	Q	D	A	L	L	A	A	L	R	L	S	A	G	S	P	G	A	A	L	A	L	F	Q
Query Conservation																			.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.
Template Conservation
Template Sequence		I	L	T	G	S	E	V	G	L	L	H	D	F	L	K	I	T	D	Y	E	S	P	L	Y	G	R	I	A	G	E	V	L	V	K	P	F	D	K	D	T	S	V	E	F	L	K	R	G	F	R	E	V	N	L	D	V	P	E	N	E	I	E	E	A	V	E	L	L	D	G	I	P	G	W	L	V	V	F	G	V
Template Known Secondary structure						S	S										T	T		T	T	S	T	T	T	T																										T	T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	N	W	Q	A	R	E	T	L	C	Q	A	L	A	Y	S	V	P	S	G	D	W	Y	S	L	L	A	A	L	N	H	E	Q	A	P	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Y	L	R	N	G	D	F	G	R	A	M	K	R	T	L	E	V	A	K	G	L	I	M	G	E	L	E	E	L	R	R	R	S	P	R	Y	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions