Job Description P28631 Confidence 93.51% Date Thu Jan 5 11:45:02 GMT 2012 Rank 392 Aligned Residues 157 % Identity 12% Template c2pl3A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:probable atp-dependent rna helicase ddx10; PDBTitle: human dead-box rna helicase ddx10, dead domain in complex with adp Resolution 2.15 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.														.	.	.	.	.	.
Predicted Secondary structure																																									.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	W	Y	P	W	L	R	P	D	F	E	K	L	V	A	S	Y	Q	A	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	.	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	C	R	G	C	Q	L
Query Conservation																																									.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		L	V	T	E	I	Q	K	Q	T	I	G	L	A	L	Q	.	.	.	.	.	.	.	G	K	D	V	L	G	A	A	K	T	G	S	G	K	T	L	A	F	L	V	P	V	L	E	A	L	Y	R	L	Q	W	T	S	T	D	G	L	G	V	L	I	I	S	P	T	R	E	L	A	Y	Q	T	F	E	V	L	R	K
Template Known Secondary structure		B														T	.	.	.	.	.	.	.	T									T	T	S																	T	T			G	G	G									S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.								.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.										.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																																											.
Query SS confidence																	.	.	.	.	.	.	.	.	.																																											.
Query Sequence		M	Q	A	G	T	H	P	D	Y	Y	T	L	A	P	E	.	.	.	.	.	.	.	.	.	K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	A	.	A	N	A	L	L	K	T	L	E	E	P	P	A
Query Conservation																	.	.	.	.	.	.	.	.	.																																											.
Alig confidence																	.	.	.	.	.	.	.	.	.																																											.
Template Conservation
Template Sequence		V	G	K	N	H	D	F	S	A	G	L	I	I	G	G	L	K	H	E	A	E	R	I	N	N	I	N	I	L	V	C	T	P	G	R	L	L	Q	H	M	D	E	T	V	S	F	H	A	T	D	L	Q	M	L	V	L	D	E	A	D	R	I	L	D	M	G	F	A	D	T	M	N	A	V	I	E	N	L	P	K
Template Known Secondary structure			T	T	T	S	S																		T	T		S																	S	S				T	T							T	T							T	T	T										T	S		T
Template Predicted Secondary structure
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		138	.	140	.	.	.	.	.					.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		E	T	W	F	F	L	A	T	.	.	.	.	R	E	P	E	R	L	L	A	T	L	R	S	R	C	R	L	H	Y	L	A
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.
Template Conservation
Template Sequence		K	R	Q	T	L	L	F	S	A	T	Q	T	K	S	V	K	D	L	A	R	L	S	L	K	N	P	E	Y	V	W	V	H
Template Known Secondary structure		T	S							S	S												S		S	S
Template Predicted Secondary structure
Template SS confidence
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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