Job Description P28631 Confidence 96.69% Date Thu Jan 5 11:45:02 GMT 2012 Rank 166 Aligned Residues 126 % Identity 13% Template c2p6uA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:afuhel308 helicase; PDBTitle: apo structure of the hel308 superfamily 2 helicase Resolution 3.14 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	W	Y	P	W	L	R	P	D	F	E	K	L	V	A	S	Y	Q	A	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		I	L	F	P	P	Q	A	E	A	V	E	K	V	F	S	.	.	.	.	.	.	.	G	K	N	L	L	L	A	M	P	T	A	A	G	K	T	L	L	A	E	M	A	M	V	R	E	A	I	K	G	G	K	S	L	Y	V	V	P	L	R	A	L	A	G	E	K	Y	E	S	F	K	K	W	E	K	I	G	L	R
Template Known Secondary structure						S	S	T							T	T	.	.	.	.	.	.	.		S							S	S																			T								S	S												G	G	G	G	T	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.								.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
																71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.					.	.	.	.	.	130	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	H	P	D	Y	Y	T	L	A	P	E	K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	A	.	.	.	.	A	N	A	L	L	K	T	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.								.	.																									.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.								.	.
Template Sequence		I	G	I	S	T	G	D	Y	E	S	R	D	E	H	L	G	D	C	D	I	I	V	T	T	S	E	.	.	.	.	.	.	.	.	.	K	A	D	S	L	I	R	.	.	N	R	A	S	W	I	K	A	V	S	C	L	V	V	D	E	I	H	L	L	D	S	E	K	R	G	A	T	L	E	I	L	V	T	K	M
Template Known Secondary structure							S			S				T	T	G	G	G		S								.	.	.	.	.	.	.	.	.								.	.	T	T		S	S	G	G	G							T	T	G	G	G	G	G		T	T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.								.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.										.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	P	P	A	E	T	W	F	F	L	A	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	R	M	N	K	A	L	R	V	I	G	L	S
Template Known Secondary structure						T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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