Job Description P28631 Confidence 97.66% Date Thu Jan 5 11:45:02 GMT 2012 Rank 112 Aligned Residues 148 % Identity 16% Template c2og2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana Resolution 2.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20												.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.				.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Query Sequence		R	P	D	F	E	K	L	V	A	S	Y	Q	A	.	.	.	.	.	.	.	.	.	.	.	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	.	.	.	C	R	G	C	Q	L	M	Q	A	G	T	H
Query Conservation															.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.																																										.	.	.
Template Conservation
Template Sequence		S	E	I	K	D	A	L	K	E	S	V	L	E	M	L	A	K	K	T	E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G	K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	L	M	A	A	G	D	T	F	R	A	A	A	S	D	Q	L	E	I	W	A	E
Template Known Secondary structure																					S					S	S	S	S									T	T	S																T	T											S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.										.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.
Query Sequence		P	D	Y	Y	T	L	A	P	E	K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	A	A	.	.	.	.	.	.	.	.	.	N	A	L	L	K	T	L	E	E	P	P	A	E	T	W	F	F	L	A
Query Conservation																																																						.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.																.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.
Template Sequence		R	T	G	C	E	I	V	V	A	E	G	D	K	A	K	A	A	T	V	L	S	K	A	V	K	R	G	K	E	E	G	Y	D	.	.	.	.	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D
Template Known Secondary structure				T							S	S	S	S																	T	T		S	.	.	.	.										S	S																				S	T	T			S
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.					.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	E	P	E	R	L	L	A	T	L	R	S	R	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	T	G	L	N	M	L	P	Q	A	R	E	F	N
Template Known Secondary structure		G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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