Job Description P28631 Confidence 97.25% Date Thu Jan 5 11:45:02 GMT 2012 Rank 128 Aligned Residues 136 % Identity 17% Template c2j7pA_ PDB info PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy Resolution 1.97 Å

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.					.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.	.	.
Query SS confidence																																			.	.	.	.
Query Sequence		H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	.	.	.	.	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	G	T	H	P	D	Y	Y	T	L	A	P	E	K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K
Query Conservation																																			.	.	.	.
Alig confidence																																			.	.	.	.																														.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.
Template Sequence		R	N	L	W	F	L	V	G	L	Q	G	S	G	K	T	T	T	A	A	K	L	A	L	Y	Y	K	G	K	G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	M	D	G	E	.	.	.	.	.	.	S	P	E	S	I	R	R	R
Template Known Secondary structure		S								S	T	T	S	S														T	T	T											S	S	T	T													T								T	T		.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.							.	.	.	.	.	.	170	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																					.	.																.
Query SS confidence																					.	.																.
Query Sequence		L	N	E	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	.	.	L	L	T	D	A	A	A	N	A	L	L	K	T	L	E	.	E	P	P	A	E	T	W	F	F	L	A	T	R	E	P	E	R	L	L	A	T	L	R	S	R	C	R	L	H	Y	L	A
Query Conservation																					.	.																.
Alig confidence																					.	.																.
Template Conservation
Template Sequence		V	E	E	K	A	R	L	E	A	R	D	L	I	L	V	D	T	A	G	R	L	Q	I	D	E	P	L	M	G	E	L	A	R	L	K	E	V	L	G	P	D	E	V	L	L	V	L	D	A	M	T	G	Q	E	A	L	S	V	A	R	A	F	D	E	K	V	G	V	T
Template Known Secondary structure									T	T													T	T																		S								T	T			T	T												T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions