Job Description P28631 Confidence 96.74% Date Thu Jan 5 11:45:02 GMT 2012 Rank 163 Aligned Residues 137 % Identity 18% Template c2iusB_ PDB info PDB header:membrane protein Chain: B: PDB Molecule:dna translocase ftsk; PDBTitle: e. coli ftsk motor domain Resolution 2.7 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.													.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	G	T	H	P	D	Y	Y	T	L	A	P	E	K	.	.	.	.	.	.	.	.	.	.	.	.	G	K	N	T	L	G
Query Conservation																																																																.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	M	P	H	.	L	L	V	A	G	T	T	G	S	G	A	S	V	G	V	N	A	M	I	L	S	M	L	Y	K	A	Q	P	E	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	F	I	M	I	D	P	K	M	L	E	L	S	V	Y	E	G	I	P	H	L	L	T	E	V	V	T
Template Known Secondary structure		G	S		S	.							T	T	S	S														T	T			T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	S	S	S	S	G	G	G	T	T		T	T	B	S	S	S		B
Template Predicted Secondary structure						.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		983	.	.	.		.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.																		.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.
			90	.	.	.	.	.	.	.	.	.	100	.	.																																										.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	V	D	A	V	R	E	V	T	E	K	L	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	A	A	N	A
Query Conservation		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	M	K	D	A	A	N	A	L	R	W	C	V	N	E	M	E	R	R	Y	K	L	M	S	A	L	G	V	R	N	L	A	G	Y	N	E	K	I	A	E	A	D	R	M	M	R	P	I	P	D	P	Y	W	H	P	V	L	K	K	E	P	Y	I	V	V	L	V	D	E	F	A	D	L	M	M	T	V	G	K	K
Template Known Secondary structure		S																									T	T		S	S														T	T				B		T	T				B
Template Predicted Secondary structure
Template SS confidence
		1045	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.
		128	.	130	.	.	.	.						.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.																	.	.										.
Query SS confidence									.	.	.	.	.																	.	.										.
Query Sequence		L	L	K	T	L	E	E	.	.	.	.	.	P	P	A	E	T	W	F	F	L	A	T	R	E	P	E	R	.	.	L	L	A	T	L	R	S	R	C	.	R	L	H	Y	L	A	P	P	P	E	Q	Y	A	V	T	W	L
Query Conservation									.	.	.	.	.																	.	.										.
Alig confidence									.	.	.	.	.																	.	.										.
Template Conservation
Template Sequence		V	E	E	L	I	A	R	L	A	Q	K	A	R	A	A	G	I	H	L	V	L	A	T	Q	R	P	S	V	D	V	I	T	G	L	I	K	A	N	I	P	T	R	I	A	F	T	V	S	S	K	I	D	S	R	T	I	L
Template Known Secondary structure																	T								S				T	T	T	S																	S	S
Template Predicted Secondary structure
Template SS confidence
		1134	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions