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Job DescriptionP28631
Confidence94.71%DateThu Jan 5 11:45:02 GMT 2012
Rank329Aligned Residues126
% Identity17%Templatec2gxqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:heat resistant rna dependent atpase; PDBTitle: hera n-terminal domain in complex with amp, crystal form 1
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. .......
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Query Sequence  RWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALI. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YALSRYL
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Template Sequence  TPTPIQAAALPLALEG. . . . . . . KDLIGQARTGTGKTLAFALPIAERLAPSQERGRKPRALVLTPTRELALQVASELTAV
Template Known Secondary structure  S

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   23......30........ .40.........50.........60.........70.........80.........90.....
 
   4950.........60.........70.........80.........90.........100.........110.........120.... ...
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Query Sequence  LCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGVDAVREVTEKLNEHARLGGAKVVWVTDAALLTDAA. ANA
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Template Sequence  APHLKVVAVYGGTGYGKQKEALLRGADAVVATP. . . . . . . . . . . GRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEE
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TTS

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S
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   96...100.........110.........120........ .130.........140.........150.........160....
 
   128.130.........140.....
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Query Sequence  LLKTLEEPPAETWFFLAT
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Template Sequence  VEALLSATPPSRQTLLFS
Template Known Secondary structure  TS
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   165....170.........180..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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