Job Description P28631 Confidence 98.72% Date Thu Jan 5 11:45:02 GMT 2012 Rank 85 Aligned Residues 189 % Identity 13% Template c1w5sB_ PDB info PDB header:replication Chain: B: PDB Molecule:origin recognition complex subunit 2 orc2; PDBTitle: structure of the aeropyrum pernix orc2 protein (adp form) Resolution 2.4 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		L	R	P	D	F	E	K	L	V	A	S	Y	Q	A	G	R	G	H	H	.	.	.	.	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	G	T	H	P	D	Y	Y	T	L	A	P	E
Query Conservation																					.	.	.	.
Alig confidence																					.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	A	L	A	R	I	Y	L	N	R	L	L	S	G	A	G	L	S	D	V	N	M	I	Y	G	S	I	G	R	V	G	I	G	K	T	T	L	A	K	F	T	V	K	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	A	A	A	K	E	G	L	T	V	K	Q	A	Y	V	N
Template Known Secondary structure																T													T	T			S	S	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.																		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.																				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																.	.	.
Query Sequence		K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L	.	.	.	.	.	.	L	T	D	A	A	A	N	A	L	L	K	T	L	E	E	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		A	F	N	A	P	N	L	Y	T	I	L	S	L	I	V	R	Q	T	G	Y	P	I	Q	V	R	G	A	P	A	L	D	I	L	K	A	L	V	D	N	L	Y	V	E	N	H	Y	L	L	V	I	L	D	E	F	Q	S	M	L	S	S	P	R	I	A	A	E	D	L	Y	T	L	L	R	V	H	E	E	I	P	S
Template Known Secondary structure		G	G	G			S													T						T	T																		T									S	T					S		T	T	S										T					S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
				135	.	.	.	.	140	.	.	.	.	.	.	.	.	.								150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.								.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure		.	.																.	.	.	.	.	.	.																														.	.	.	.	.	.	.																	.	.	.	.
Query SS confidence		.	.																.	.	.	.	.	.	.																														.	.	.	.	.	.	.																	.	.	.	.
Query Sequence		.	.	P	P	A	E	T	W	F	F	L	A	T	R	E	P	E	.	.	.	.	.	.	.	R	L	L	A	T	L	R	S	R	C	R	L	H	Y	L	A	P	P	P	E	Q	Y	A	V	T	W	L	S	R	.	.	.	.	.	.	.	E	V	T	M	S	Q	D	A	L	L	A	A	L	R	L	S	.	.	.	.
Query Conservation		.	.																.	.	.	.	.	.	.																														.	.	.	.	.	.	.																	.	.	.	.
Alig confidence		.	.																.	.	.	.	.	.	.																														.	.	.	.	.	.	.																	.	.	.	.
Template Conservation
Template Sequence		R	D	G	V	N	R	I	G	F	L	L	V	A	S	D	V	R	A	L	S	Y	M	R	E	K	I	P	Q	V	E	S	Q	I	G	F	K	L	H	L	P	A	Y	K	S	R	E	L	Y	T	I	L	E	Q	R	A	E	L	G	L	R	D	T	V	W	E	P	R	H	L	E	L	I	S	D	V	Y	G	E	D	K
Template Known Secondary structure		T	T	S													T															T	T		S																									B		G	G	G															G	G	G
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
				195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	G	S	P	G	A	A	L	A	L	F	Q	G	D	N	W	Q	A
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		G	G	D	G	S	A	R	R	A	I	V	A	L	K	M	A	C	E	M	A
Template Known Secondary structure		T	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions