Job Description P28631 Confidence 99.56% Date Thu Jan 5 11:45:02 GMT 2012 Rank 34 Aligned Residues 189 % Identity 14% Template c1r6bX_ PDB info PDB header:hydrolase Chain: X: PDB Molecule:clpa protein; PDBTitle: high resolution crystal structure of clpa Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20									.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.
Query Sequence		M	R	W	Y	P	W	L	R	P	D	F	E	K	L	V	A	S	Y	Q	A	.	.	.	.	.	.	.	.	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	G	T
Query Conservation																						.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	M	L	V	F	G	Q	D	K	A	I	E	A	L	T	E	A	I	K	M	A	R	A	G	L	G	H	E	H	K	P	V	G	S	F	L	F	A	G	P	T	G	V	G	K	T	E	V	T	V	Q	L	S	K	A	L	G	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	T	S		S																	T	T		S		T	T	S		S								S	T	T	S	S													T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.														.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.
Query Sequence		H	P	D	Y	Y	T	L	A	P	E	K	G	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	A	A	N	A	L	L	K	T	L	E	E	.	.	.	.	.
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.
Alig confidence		.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.																											.	.	.	.	.
Template Conservation		.	.	.																																											.	.	.	.
Template Sequence		.	.	.	L	L	R	F	D	M	S	E	Y	M	E	R	H	T	V	S	R	L	I	G	A	P	P	G	Y	V	G	F	D	Q	G	G	L	L	T	D	A	V	I	K	H	P	.	.	.	.	H	A	V	L	L	L	D	E	I	E	K	A	H	P	D	V	F	N	I	L	L	Q	V	M	D	N	G	T	L	T	D
Template Known Secondary structure		.	.	.						G	G	G		S	S	S	S			S	S	S					S		S						T	T										S	.	.	.	.	S							T	G	G	G	S															S
Template Predicted Secondary structure		.	.	.																																											.	.	.	.
Template SS confidence
					516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.					.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
								135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.									.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.															.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																							.	.	.	.	.	.	.	.				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																							.	.	.	.	.	.	.	.				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	P	P	A	E	T	W	F	F	L	A	T	R	E	P	E	R	L	L	A	T	L	R	.	.	.	.	.	.	.	.	S	R	C	.	R	L	H	Y	L	A	P	P	P	E	Q	Y	A	V	T	W	L	S	R	E	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	Q	D
Query Conservation		.	.	.	.	.	.																							.	.	.	.	.	.	.	.				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																							.	.	.	.	.	.	.	.				.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	N	G	R	K	A	D	F	R	N	V	V	L	V	M	T	T	N	A	G	V	R	A	M	E	E	I	K	K	I	F	T	P	E	F	R	N	R	L	D	N	I	I	W	F	D	H	L	S	T	D	V	I	H	Q	V	V	D	K	F	I	V	E	L	Q	V	Q	L	D	Q	K	G	V	S	L	E	V	S	Q	E
Template Known Secondary structure		T	T	T						T	T									S	S											S						T	T		S																															T	T
Template Predicted Secondary structure
Template SS confidence
		589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.				.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		A	L	L	A	A	L	R	L	S	.	.	.	A	G	S	P	G	A	A	L	A	L	F	Q	G	D	N	W	Q	A	R	E	T	L	C
Query Conservation											.	.	.
Alig confidence											.	.	.
Template Conservation
Template Sequence		A	R	N	W	L	A	E	K	G	Y	D	R	A	M	G	A	R	P	M	A	R	V	I	Q	D	N	L	K	K	P	L	A	N	E	L
Template Known Secondary structure												B	T	T	T	B	T	T	T										T
Template Predicted Secondary structure
Template SS confidence
		686	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions