Job Description P28631 Confidence 99.94% Date Thu Jan 5 11:45:02 GMT 2012 Rank 11 Aligned Residues 291 % Identity 16% Template c1iqpF_ PDB info PDB header:replication Chain: F: PDB Molecule:rfcs; PDBTitle: crystal structure of the clamp loader small subunit from2 pyrococcus furiosus Resolution 2.80 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	P	D	F	E	K	L	V	A	S	Y	Q	A	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	G	T	H	P	D	Y	Y	T	L	A	P	E	K	G	K	N
Query Conservation
Alig confidence																					.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	E	H	I	V	K	R	L	K	H	Y	V	K	T	G	S	M	P	H	.	L	L	F	A	G	P	P	G	V	G	K	T	T	A	A	L	A	L	A	R	E	L	F	G	E	N	W	R	H	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	L	E	L	N	A	S	D
Template Known Secondary structure														T	T	T					.					S		T	T	S	S	T	T												G	G	G					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T
Template Predicted Secondary structure																					.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.																							.	80	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100			.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		T	L	G	V	D	A	V	R	E	V	T	E	K	L	.	.	N	E	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	A	A	N	A	L	L	K	T	L	E	E	P	P	A	E	T	W	F	F	L	A	T	R	E	P	E	R	L	L	A	T	L	R	S	R	C	R	L	H	Y	L
Query Conservation																.	.
Alig confidence																.	.
Template Conservation
Template Sequence		E	R	G	I	N	V	I	R	E	K	V	K	E	F	A	R	T	K	P	I	G	G	A	S	F	K	I	I	F	L	D	E	A	D	A	L	T	Q	D	A	Q	Q	A	L	R	R	T	M	E	M	F	S	S	N	V	R	F	I	L	S	C	N	Y	S	S	K	I	I	E	P	I	Q	S	R	C	A	I	F	R	F
Template Known Secondary structure		S	S													T	T	S			S	S	S		S								T	G	G	G	S															T	T	T	T								S		G	G	G	S						T	T
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		A	P	P	P	E	Q	Y	A	V	T	W	L	.	.	.	.	.	S	R	E	V	T	M	S	Q	D	A	L	L	A	A	L	R	L	S	A	G	S	P	G	A	A	L	A	L	F	Q	G	D	N	W	Q	A	R	E	T	L	C	Q	A	L	A	Y	S	V	P	S	G	D	W	Y	S	L	L	A	A	L	N	H	E
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.
Template Conservation
Template Sequence		R	P	L	R	D	E	D	I	A	K	R	L	R	Y	I	A	E	N	E	G	L	E	L	T	E	E	G	L	Q	A	I	L	Y	I	A	E	G	D	M	R	R	A	I	N	I	L	Q	A	A	A	A	L	D	K	K	I	T	D	E	N	V	F	M	V	A	S	R	A	R	P	E	D	I	R	E	M	M	L	L	A
Template Known Secondary structure																					T																T	T														T	T		S												T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	P	A	R	L	H	W	L	A	T	L	L	M	D	A	L	K	R	H	H	G	A	A	Q	V	T	N	V	D	V	P	G	L	V	A	E	L	A	N	H	L	S	P	S	R	L	Q	A	I	L	G	D	V	C	H	I	R	E	Q	L	M	S	V	T	G	I	N	R	E	L	L	I	T	D	L	L	L	R	I
Query Conservation
Alig confidence																																				.	.	.																											.	.
Template Conservation																																				.	.	.																											.	.
Template Sequence		L	K	G	N	F	L	K	A	R	E	K	L	R	E	I	L	L	K	Q	G	L	S	G	E	D	V	L	V	Q	M	H	K	E	V	.	.	.	F	N	L	P	I	E	E	P	K	K	V	L	L	A	D	K	I	G	E	Y	N	F	R	L	V	E	.	.	G	A	N	E	I	I	Q	L	E	A	L	L	A	Q	F
Template Known Secondary structure				T																T															G	.	.	.	G	G	S																								.	.
Template Predicted Secondary structure																																				.	.	.																											.	.
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	Y	L	Q	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	I	G	K	K
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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