Job Description P28631 Confidence 99.04% Date Thu Jan 5 11:45:02 GMT 2012 Rank 75 Aligned Residues 188 % Identity 13% Template c1fnnB_ PDB info PDB header:cell cycle Chain: B: PDB Molecule:cell division control protein 6; PDBTitle: crystal structure of cdc6p from pyrobaculum aerophilum Resolution 2.00 Å

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		8	.	10	.	.	.	.	.	.	.	.	.						20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure														.	.	.	.	.
Query SS confidence														.	.	.	.	.
Query Sequence		R	P	D	F	E	K	L	V	A	S	Y	Q	.	.	.	.	.	A	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	S	C	G	H	C	R	G	C	Q	L	M	Q	A	G	T	H	P	D	Y	Y	T	L	A	P	E
Query Conservation														.	.	.	.	.
Alig confidence														.	.	.	.	.
Template Conservation
Template Sequence		E	Q	Q	L	Q	Q	L	D	I	L	L	G	N	W	L	R	N	P	G	H	H	Y	P	R	A	T	L	L	G	R	P	G	T	G	K	T	V	T	L	R	K	L	W	E	L	Y	K	D	K	T	T	A	R	F	V	Y	I	N	G	F	I	Y	R	N	F	T	A	I	I	G	E	I	A	R	S	L	N	I	P	F
Template Known Secondary structure																		S		B	S	S										T	T	S	S													T	T	S										T	T	T			S													T
Template Predicted Secondary structure
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.					.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.														.	.	.
Query SS confidence																																																						.	.	.	.														.	.	.
Query Sequence		K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	A	R	L	G	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	A	A	N	A	L	L	K	T	L	E	E	.	.	.	.	P	P	A	E	T	W	F	F	L	A	T	R	E	.	.	.	P	E	R	L	L	A	T	L
Query Conservation																																																						.	.	.	.														.	.	.
Alig confidence																							.	.	.																													.	.	.	.														.	.	.
Template Conservation																							.	.	.
Template Sequence		P	R	R	G	L	S	R	D	E	F	L	A	L	L	V	E	H	L	R	E	R	.	.	.	D	L	Y	M	F	L	V	L	D	D	A	F	N	L	A	P	D	I	L	S	T	F	I	R	L	G	Q	E	A	D	K	L	G	A	F	R	I	A	L	V	I	V	G	H	N	D	A	V	L	N	N	L	D	P	S	T
Template Known Secondary structure			S	S																		T	.	.	.	T									T	G	G	G	S												T	T						S	S	B									S	S	T					T	S
Template Predicted Secondary structure																							.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		156	.	.	.			160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.								.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure						.	.																				.	.	.	.	.	.	.
Query SS confidence						.	.																				.	.	.	.	.	.	.
Query Sequence		R	S	R	C	.	.	R	L	H	Y	L	A	P	P	P	E	Q	Y	A	V	T	W	L	S	R	.	.	.	.	.	.	.	E	V	T	M	S	Q	D	A	L	L	A	A	L	R	L	S	A	G	S	P
Query Conservation						.	.																				.	.	.	.	.	.	.
Alig confidence						.	.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	I	M	G	K	Y	V	I	R	F	S	P	Y	T	K	D	Q	I	F	D	I	L	L	D	R	A	K	A	G	L	A	E	G	S	Y	S	E	D	I	L	Q	M	I	A	D	I	T	G	A	Q	T
Template Known Secondary structure						T	T									B																B		T	T	S	S													S	B	S	S
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions