Job Description P76115 Confidence 52.33% Date Thu Jan 5 12:19:07 GMT 2012 Rank 32 Aligned Residues 163 % Identity 15% Template d2fgqx1 SCOP info Transmembrane beta-barrels Porins Porin Resolution 1.45

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		499	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	I	E	I	G	S	K	T	R	I	G	D	G	L	L	S	L	A	L	F	Q	T	D	T	D	D	E	I	V	V	D	S	S	S	G	G	R	T	T	Y	K	N	A	G	K	T	R	R	Q	G	A	E	L	A	W	D	Q	R	F	A	G	D	F	R	V	N	A	S	W	T	W	L	D	A	T	Y	R	S	N
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Sequence		R	Y	I	G	G	Y	V	A	Y	D	N	G	P	L	S	A	S	L	G	L	A	Q	Q	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	A	V	G	G	L	A	T	D	R	D	E	I	T	L	G	A	S	Y	N	F	G	V	.	A	K	L	S	G	L	L	Q	Q	T	K	F	K	R	D	I	G
Template Known Secondary structure													S	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T																	S	S	.															T	T	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.																.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	C	N	E	Q	D	C	N	G	N	R	M	P	G	I	A	R	N	M	G	F	A	S	I	G	Y	V	P	E	D	G	W	Y	A	G	T	E	A	R	Y	M	G	D	I	M	A	D	D	E	N	T	A	K	A	P	S	Y	T	L	V	G	L	F	T	G	Y	K	Y	N	Y	H	N	L	T	V	D	L	F	G	R
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.																	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.																	.	.	.
Template Sequence		G	D	I	K	T	N	.	.	.	.	.	.	.	.	.	.	.	.	S	Y	M	L	G	A	S	A	P	V	G	G	V	G	E	V	K	L	Q	Y	A	L	Y	D	Q	K	A	I	D	.	.	.	.	.	.	.	S	K	A	H	Q	I	T	L	G	Y	V	H	N	L	S	K	.	.	.	R	T	A	L	Y	G	N
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.											T	T	T													G	G	G	T	.	.	.	.	.	.	.														S	S	S	.	.	.	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.																	.	.	.
Template SS confidence
		234	.	.	.	.	.													240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.								.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.				.	.	.	.	.	290	.
		659	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	N	L	F	D	K	E	Y	V	G	S	V	I	V	N	E	S	N	G	R	Y	Y	E	P	S	P	G	R	N	Y	G	V	G	M	N	I	A	W	R	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	F	L	K	N	K	D	A	S	T	L	G	L	Q	A	K	G	V	Y	A	G	G	V	Q	A	G	E	S	Q	T	G	V	Q	V	G	I	R	H	A	F
Template Known Secondary structure									T	T							B	T	T	T	B		S				T	T
Template Predicted Secondary structure
Template SS confidence
		292	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions