Job Description P76115 Confidence 66.95% Date Thu Jan 5 12:19:07 GMT 2012 Rank 26 Aligned Residues 136 % Identity 13% Template d1p4ta_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 2.55

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	K	P	S	T	N	D	T	I	E	I	G	S	K	T	R	I	G	D	G	L	L	S	L	A	L	F	Q	T	D	T	D	D	E	I	V	V	D	S	S	S	G	G	R	T	T	Y	K	N	A	G	K	T	R	R	Q	G	A	E	L	A	W	D	Q	R	F	A	G	D	F	R	V	N	A	S	W	T	W	L
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	G	S	A	K	G	F	S	P	R	I	S	A	G	Y	R	I	N	D	L	R	F	A	V	D	Y	T	R	Y	K	N	Y	K	A	P	S	.	.	.	.	.	.	.	.	.	.	.	.	T	D	F	K	L	Y	S	I	G	A	S	A	I	Y	D	F	D	T	Q	S	P	V	K	P	Y	L	G	A	R	L	S
Template Known Secondary structure		S	S																	T	T													S	S			S	.	.	.	.	.	.	.	.	.	.	.	.	S																		S	S	S
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.													.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	T	Y	R	S	N	V	C	N	E	Q	D	C	N	G	N	R	M	P	G	I	A	R	N	M	G	F	A	S	I	G	Y	V	P	E	D	G	W	Y	A	G	T	E	A	R	Y	M	G	D	I	M	A	D	D	E	N	T	A	K	A	P	S	Y	T	L	V	G	L	F	T	G	Y	K	Y
Query Conservation
Alig confidence																						.	.	.	.																																						.	.	.
Template Conservation																						.	.	.	.																																						.	.	.
Template Sequence		L	N	R	A	S	V	D	L	G	G	S	D	S	F	S	Q	T	S	I	G	.	.	.	.	L	G	V	L	T	G	V	S	Y	A	V	T	P	N	V	D	L	D	A	G	Y	R	Y	N	Y	I	G	K	V	N	T	V	K	N	V	R	S	.	.	.	G	E	L	S	A	G	V	R	V	K	F
Template Known Secondary structure										T	T											.	.	.	.													T	T																T	T							.	.	.
Template Predicted Secondary structure																						.	.	.	.																																						.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.				.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions