Job Description P0A6I6 Confidence 99.64% Date Thu Jan 5 11:03:13 GMT 2012 Rank 27 Aligned Residues 133 % Identity 21% Template c3op1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:macrolide-efflux protein; PDBTitle: crystal structure of macrolide-efflux protein sp_1110 from2 streptococcus pneumoniae Resolution 2.49 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.													.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	R	A	I	Y	P	G	T	F	D	P	I	T	N	G	H	I	D	I	V	T	R	A	T	Q	M	F	D	H	V	.	.	.	I	L	A	I	A	A	S	P	S	K	K	P	.	.	.	.	.	.	.	.	.	.	.	.	M	F	T	L	E	E	R	V	A	L	A	Q	Q	A	T	A	H	L	G	N	V	E
Query Conservation																																	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.															.	.
Template Conservation																																																																										.	.
Template Sequence		S	D	S	V	V	V	L	G	Y	F	D	G	I	H	K	G	H	Q	E	L	F	R	V	A	N	K	A	A	R	K	D	L	L	P	I	V	V	X	T	F	N	E	S	P	K	I	A	L	E	P	Y	H	P	D	L	F	L	H	I	L	N	P	A	E	R	E	R	K	L	K	R	E	.	.	G	V	E	E	L	Y
Template Known Secondary structure		S							S			S	S																S	S	T	T										S	S		T					S				G	G	G	G		B	S	S													.	.	T
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.
		67	.	.	70	.										.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.			.	.	.	130	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																																								.	.
Query SS confidence							.	.	.	.	.	.	.	.	.																																																								.	.
Query Sequence		V	V	G	F	S	.	.	.	.	.	.	.	.	.	D	L	M	A	N	F	A	R	N	Q	H	A	T	V	L	I	R	G	L	R	A	V	A	D	F	E	Y	E	M	Q	L	A	H	M	N	R	H	L	M	P	E	L	E	S	V	F	L	M	P	S	K	E	W	S	F	.	.	I	S	S	S	L	V	K	E	V
Query Conservation							.	.	.	.	.	.	.	.	.																																																								.	.
Alig confidence							.	.	.	.	.	.	.	.	.																			.	.	.	.																																		.	.
Template Conservation																																		.	.	.	.
Template Sequence		L	L	D	F	S	S	Q	F	A	S	L	T	A	Q	E	F	F	A	T	Y	I	K	A	X	N	A	K	I	I	V	A	G	.	.	.	.	F	D	Y	T	F	G	S	D	K	K	T	A	E	D	L	K	N	Y	F	D	G	E	V	I	I	V	P	P	V	E	D	E	K	G	K	I	S	S	T	R	I	R	Q	A
Template Known Secondary structure											T															T								.	.	.	.	T	T			B	T	T	T	T	B		S	T	T						S	S									B		S	S		B
Template Predicted Secondary structure																																		.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		136	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	H	Q	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	D	G	N
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
		171	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions