 |
Job Description | P0A6I6 | Confidence | 98.39% | Date | Thu Jan 5 11:03:13 GMT 2012 |
Rank | 47 | Aligned Residues | 113 |
% Identity | 19% | Template | c3guzB_ |
PDB info |
PDB header:ligase | Chain: B: PDB Molecule:pantothenate synthetase; |
PDBTitle: structural and substrate-binding studies of pantothenate2 synthenate (ps)provide insights into homotropic inhibition3 by pantoate in ps's
|
Resolution | 1.67 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | K | R | A | I | Y | P | G | T | F | D | P | I | T | N | G | H | I | D | I | V | T | R | A | T | Q | M | F | D | H | V | I | L | A | I | A | A | S | P | S | . |
. |
. |
. |
. |
. |
. |
. |
K | K | P | M | F | T | L | E | E | R | V | A | L | A | Q | Q | A | T | A | H | L | G | N | V | E | V | V | G | F | S | D | L |
Query Conservation |   |
  |
|
|   |
|   |   |
|
|
|
|
|   |
|   |
|
|   |   |
|   |   |   |
|   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|
|
|
|
|   |
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|   |
|
|   |   |   |
|
|   |   |   |
|   |   |
|   |   |   |
|   |   |
|
|   |   |   | . | . |
|
|
|   |
|
|   |
|   |   |   |   |
|
Template Sequence |   |
G | K | R | V | A | L | V | P | T | M | G | N | L | H | D | G | H | M | K | L | V | D | E | A | K | A | R | A | D | V | V | A | V | S | I | F | V | N | P | M | Q | F | D | R | P | E | D | L | A | R | Y | P | R | T | L | Q | E | D | C | E | K | L | N | K | R | . |
. |
K | V | D | L | V | F | A | P | S | V | K | E | I |
Template Known Secondary structure |   |
T |
|
|  |  |  |  |  |  |
| S |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S |  |  |  |  |  |  |
|
|
| G | G | G |
| S | S |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |  |  |  |  | T | . | . | T |
| S |  |  |  |
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
21 | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | |
|
. | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
74 | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | A | N | F | A | R | N | Q | H | A | T | V | L | I | R | G | L | R | A | V | A | D | F | E | Y | E | M | Q | L | A | H | M | N | R | H | L | M | P | E | L | E | S | V | F | L | M |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |   |   |
|   |   |
|
|   |   |
|
|
|
|
|   |
|
|   |
|
|
|   |
|
|   |   |
|
|   |
|   |   |   |   |
|
|   | . | . | . |
|
|   |
|
|   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |
|
|   |   |
|
Template Sequence |   |
Y | P | N | G | T | E | T | H | T | Y | V | D | V | P | G | R | P | G | H | F | R | G | V | S | T | I | V | S | K | L | F | N | L | V | Q | P | D | I | A | C | F | G | E | . |
. |
. |
K | D | F | Q | Q | L | A | L | I | R | K | M | V | A | D | M | G | F | D | I | E | I | V | G | V | P |
Template Known Secondary structure |   |
| T | T |
| S | T | T | S |
|
|
|
|
|
|
|
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S |  |  |  |  |  | S | . | . | . | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
|
|
. | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|