Job Description P0A6I6 Confidence 99.36% Date Thu Jan 5 11:03:13 GMT 2012 Rank 32 Aligned Residues 155 % Identity 15% Template c3gmiA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0348 protein mj0951; PDBTitle: crystal structure of a protein of unknown function from2 methanocaldococcus jannaschii Resolution 1.91 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																									.	.	.	.																																	.	.	.	.	.
Query SS confidence																																									.	.	.	.																																	.	.	.	.	.
Query Sequence		M	Q	K	R	A	I	Y	P	G	T	F	D	P	I	T	N	G	H	I	D	I	V	T	R	A	T	Q	M	F	D	H	V	I	L	A	I	A	A	S	.	.	.	.	P	S	K	K	P	M	F	T	L	E	E	R	V	A	L	A	Q	Q	A	T	A	H	L	G	N	V	E	V	V	G	F	S	.	.	.	.	.
Query Conservation																																									.	.	.	.																																	.	.	.	.	.
Alig confidence										.																															.	.	.	.																				.	.												.	.	.	.	.
Template Conservation										.																																																						.	.
Template Sequence		D	K	I	V	C	D	F	T	.	E	Y	N	P	L	H	K	G	H	K	Y	A	L	E	K	G	K	E	H	G	I	F	I	S	V	L	P	G	P	L	E	R	S	G	R	G	I	P	Y	F	L	N	R	Y	I	R	A	E	M	A	I	R	A	.	.	G	A	D	I	V	V	E	G	P	P	M	G	I	M	G	S
Template Known Secondary structure										.			T	T														T	S	S									T	T	S	B		T	T	S	S	B		S	S													.	.	T		S								G	G	G	S
Template Predicted Secondary structure										.																																																						.	.
Template SS confidence
		50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
						72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.																																								.	.	.
Predicted Secondary structure		.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	D	L	M	A	N	F	A	R	N	Q	H	A	T	V	L	I	R	G	L	R	A	V	A	D	F	E	Y	E	M	Q	L	A	H	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	R	H
Query Conservation		.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	Q	Y	M	R	C	L	I	K	M	F	Y	S	L	G	A	E	I	I	P	R	G	Y	I	P	E	K	T	M	E	K	V	I	D	C	I	N	K	G	Y	H	I	Q	V	K	P	Y	K	I	I	C	I	E	T	G	E	I	L	G	E	K	L	N	I	D	N	Y	V	I	A	S	M	S	Q	M	I	Y	K	L	N
Template Known Secondary structure																T																							T	T							T	T					T	T	T						S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.
Query SS confidence																																		.	.
Query Sequence		L	M	P	E	L	E	S	V	F	L	M	P	S	K	E	W	S	F	I	S	S	S	L	V	K	E	V	A	R	H	Q	G	.	.	D	V	T	H	F	L	P	E	N	V	H	Q	A	L	M	A	K	L
Query Conservation																																		.	.
Alig confidence																																		.	.
Template Conservation
Template Sequence		R	E	G	L	K	F	N	P	K	F	V	F	V	K	R	L	E	G	I	S	G	T	K	I	R	E	A	I	F	S	G	K	F	E	D	I	K	N	M	L	P	K	T	T	L	S	I	L	K	E	L	Y
Template Known Secondary structure			T	T													S														T	T		G	G	G	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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