Job Description P0A6I6 Confidence 98.72% Date Thu Jan 5 11:03:13 GMT 2012 Rank 41 Aligned Residues 154 % Identity 18% Template c1xnjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:bifunctional 3'-phosphoadenosine 5'-phosphosulfate PDBTitle: aps complex of human paps synthetase 1 Resolution 1.98 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.								.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.
Predicted Secondary structure																											.	.	.	.	.	.	.																																				.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.																																				.	.	.	.
Query Sequence		K	R	A	I	Y	P	G	T	F	D	P	I	T	N	G	H	I	D	I	V	T	R	A	T	Q	.	.	.	.	.	.	.	M	F	D	H	V	I	L	A	I	A	A	S	P	S	K	K	P	M	F	T	L	E	E	R	V	A	L	A	Q	Q	A	T	A	H	L	.	.	.	.	G	N	V	E	V	V	G	F	S
Query Conservation																											.	.	.	.	.	.	.																																				.	.	.	.
Alig confidence																											.	.	.	.	.	.	.																																				.	.	.	.
Template Conservation
Template Sequence		D	A	V	S	A	F	Q	L	R	N	P	V	H	N	G	H	A	L	L	M	Q	D	T	H	K	Q	L	L	E	R	G	Y	R	R	P	V	L	L	L	H	P	L	G	G	W	T	K	D	D	D	V	P	L	M	W	R	M	K	Q	H	A	A	V	L	E	E	G	V	L	N	P	E	T	T	V	V	A	I	F	P
Template Known Secondary structure		S								S	S																					T		S	S								B		S				T	T	S																T	T	S	S		G	G	G						B
Template Predicted Secondary structure
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
		72	.	.												.	.	.	.	.	80	.	.	.	.	.	.	.	.	.									90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Query Sequence		D	L	M	.	.	.	.	.	.	.	.	.	.	.	A	N	F	A	R	N	Q	H	A	T	V	L	I	R	G	.	.	.	.	.	.	.	.	L	R	A	V	A	D	F	E	Y	E	M	Q	L	A	H	M	N	R	H	L	M	P	E	L	E	S	V	F	L	M	P	S	K	E	W	S	F	.	.	.	.	.	.
Query Conservation					.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.																																						.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	M	M	Y	A	G	P	T	E	V	Q	W	H	C	R	A	R	M	V	A	G	A	N	F	Y	I	V	G	R	D	P	A	G	M	P	H	P	E	T	G	K	D	L	Y	E	P	S	H	G	A	K	V	L	T	M	A	P	G	L	I	T	L	E	I	V	P	F	R	V	A	A	Y	N	K	K	K	K	R	M
Template Known Secondary structure																						T	T		S						S	S	T	T			B		T	T	T		S	B	S	S		T	T										T	T		T	T	S												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
															127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	S	S	L	V	K	E	V	A	R	H	Q	G	D	V	.	T	H	F	L	P	E	N	V	H	Q	A	L	M	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		D	Y	Y	D	S	E	H	H	E	D	F	E	F	I	S	G	T	R	M	R	K	L	A	R	E	G	Q	K	P	P	E	G	F	M	A	P	K	A	W	T	V	L	T	E
Template Known Secondary structure						S	T	T	T	T	T															T	T					T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions