Job Description P0A6W3 Confidence 10.09% Date Thu Jan 5 11:04:03 GMT 2012 Rank 8 Aligned Residues 112 % Identity 14% Template c3dinF_ PDB info PDB header:membrane protein, protein transport Chain: F: PDB Molecule:preprotein translocase subunit secy; PDBTitle: crystal structure of the protein-translocation complex formed by the2 secy channel and the seca atpase Resolution 4.50 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		H	L	V	K	Y	Y	S	G	F	N	V	F	S	Y	L	T	F	R	A	I	V	S	L	L	T	A	L	F	I	S	L	W	M	G	P	R	M	I	A	.	.	H	L	Q	K	L	S	F	G	Q	V	V	R	N	D	G	P	E	S	H	F	S	K	R	G	T	P	T	M	G	G	I	M	I	L	T	A	I	V	I
Query Conservation																																									.	.
Alig confidence																																									.	.
Template Conservation
Template Sequence		T	L	K	N	L	F	R	A	G	G	F	L	Y	L	L	I	Y	G	L	L	V	F	F	F	T	Y	F	Y	S	V	V	I	F	D	P	R	E	I	S	E	N	I	R	K	Y	G	G	Y	I	P	G	L	R	P	G	R	S	T	E	Q	Y	L	H	R	V	L	N	R	V	T	F	I	G	A	V	F	L	V	V	I
Template Known Secondary structure							S	S	T	T																					T		T	T						T	T	S							S	S						T	T
Template Predicted Secondary structure
Template SS confidence
		294	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	L	L	W	A	Y	P	S	N	P	Y	V	W	C	V	L	V	V	L	V	G	Y	G	V	I	G	F	V	D	D	Y	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	L	P	Y	L	V	Q	G	A	I	K	V	N	V	W	I	G	G	T	S	A	L	I	A	V	G	V	A	L	D	I	I	Q
Template Known Secondary structure									T	T	T	S			S			T	T
Template Predicted Secondary structure
Template SS confidence
		374	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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