Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6W3
Confidence2.98%DateThu Jan 5 11:04:03 GMT 2012
Rank64Aligned Residues97
% Identity14%Templatec2wwbA_
PDB info PDB header:ribosomeChain: A: PDB Molecule:protein transport protein sec61 subunit alpha isoform 1; PDBTitle: cryo-em structure of the mammalian sec61 complex bound to the2 actively translating wheat germ 80s ribosome
Resolution6.48 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  SGFNVFSYLTFRAIVSLLTALFISLWM. . . GPRMIAHLQKLSFGQVVRNDGPESHFSKRGTPTM. . . GGIMILTAIVISV
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Template Sequence  DPVHAVVYIVFMLGSCAFFSKTWIEVSGSSAKDVAKQLKEQQMVMRGHRETSMVHELNRYIPTAAAFGGLCIGALSVLAD
Template Known Secondary structure  SSTTTSS


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   357..360.........370.........380.........390.........400.........410.........420.........430......
 
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Query Sequence  LLWAYPSNPYVWCVLVVLVGYGVIGFVDDYRK
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Template Sequence  FLGAIG. . . . . . . . . SGTGILLAVTIIYQYFE
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   437..440.. .......450.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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